| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase beta' subunit
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| KO |
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| Organism |
tol Thalassolituus oleivorans MIL-1
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:tol00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TOL_3456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:tol03021]
TOL_3456
03400 DNA repair and recombination proteins [BR:tol03400]
TOL_3456
Enzymes [BR:tol01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TOL_3456
Transcription machinery [BR:tol03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TOL_3456
DNA repair and recombination proteins [BR:tol03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TOL_3456
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(3618588..3622811)
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| AA seq |
1407 aa
MKDLVNFLRNQNNADEFDAIRIGLASPAMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQAKVRRERMGHIDLASPVAHIWFLKSL
PSRIGLMLDMTLRDIERILYYESFVVTEPGMTTLEVGQLLSDEQYYEAIEEFGDEFEAKM
GAEAIQMLLGQIDLPEEVQRLREEIPGTTSETKIKKLSKRLKILEAFHNSGNDPQWMIMS
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELSAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPQ
LRLHECGLPKKMALELFKPFIFSKLEHRGLATTIKAAKKMVERETPEVWDILADVIREHP
VMLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTIEAQLEA
RALMMATNNVLSPANGEPIIVPSQDVVLGLYWMIRDRINAKGEGMMLADLDEVTRAYQTG
AAHLQAKVKVRIKETSIDINGGSETITRVVDTTIGRALLFRIVPDGLSFDLVNQPMKKKA
ISNLINTAYRRVGLKDTVIFADQVMYTGFQFATRSGSSIGVNDFVIPDEKAEIVANADAE
VKEIESQFASGLVTHGEKYNKVIDIWSRANELVAKAMMDNLGKEKVIDRDGNEVDQESFN
SVYMMADSGARGSPAQIRQLAGMRGLMAKPDGSIIETPIVANFREGLNVLQYFTSTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTDRDCGTEHGLQMTPLIEGGDVVVALGGRIL
GRVIATDVYKPGSVGDIVVPAGTLIDEAWVQKIEAEGIDEVKVRSAITCESRVGICAACY
GRDLGRGHQVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRSSAADSVQVKNNGTVR
LHNLKTVTRDNGNLVAVSRSGSIALADEHGRERELYKLPYGAVISVVDGEKVQAGQKVAS
WDPHTHPIVTEVKGRIEFVGMDEGITINRQTDELTGLSNIEVIDPKDRPAAGKDIRPMVK
LVDASGNDVSLPGTNAPAQYMLPPNALVNHENGTEVSVGDIIARIPQETSGNKDITGGLP
RVADLFEARKPKEPAILAEITGTVSFGKETKGKKRLVITPNDGGDVYEELIHKWRHMNVF
EGEQVEKGEVISDGPMNPHDILRLQGVGQLAMYITNEVQEVYRLQGVGIDDKHIEVIVRQ
MLRKVLIHENGDSSFIPGDQVEYTNYLTENEKLVEAGKIPAKSERVLLGITKASLATESF
ISAASFQETTRVLTEGAVTGKVDNLRGLKENVVVGRLIPAGTGLAYHADRKRKRLNRDNE
RRKALPEGLSVSAEDMEAKLSEAFSDK |
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| NT seq |
4224 nt +upstreamnt +downstreamnt
atgaaagacttagtcaattttctgcgcaatcagaacaacgctgacgagtttgacgccatc
cgcatcggcctcgcctctccagcaatgattcgctcatggtccttcggtgaagttaaaaag
ccggaaaccattaactatcgtacgttcaagcctgagcgtgatggtttattttgcgcacgc
atctttggtcctattaaggactatgaatgcttgtgtggtaagtacaagcgccttaagcac
cgcggagtaatctgtgagaagtgtggcgttgaagttactcaagccaaagtacgtcgtgag
cgtatgggtcacatcgacctagcgtcaccggttgcacatatttggttcttgaagtcactg
ccatctcgtatcggtttgatgctggatatgaccctgcgtgacatcgaacgaattctttac
tacgaatcattcgttgtaactgagccaggcatgaccacgcttgaagtgggtcagttgctg
tctgatgaacagtactacgaagcgattgaagaattcggtgatgagttcgaagctaaaatg
ggtgctgaagccatccagatgctattgggccaaatcgatctaccagaagaagttcagcgc
ctgcgtgaagaaattccgggcacgacttctgaaactaagatcaagaagctatcaaagcgt
ctaaaaatacttgaggccttccataattctggaaacgatcctcagtggatgatcatgtct
gtattgccagtattaccaccggatttgcgtccattggtaccactggatggcggtcgtttc
gctacttcggatctaaatgatctgtatcgtcgcgttattaaccgtaacaaccgtctaaag
cgtttgttagagcttagcgctccagacatcatcgtgcgcaacgaaaagcgtatgctgcaa
gaagcggtagatgccctgttggataacggtcgtcgcggtcgtgcgattacgggttctaac
aagcgtcctttgaagtcactggctgacatgatcaaaggtaagcaaggtcgtttccgtcaa
aacttacttggtaagcgtgttgactactcaggccgttcggttattaccgtaggtccgcag
ttgcgtctgcatgagtgtggtctgccgaagaaaatggcacttgaattgttcaagccgttt
atcttcagcaaactagagcaccgcggtttagccacaaccattaaagctgcaaagaaaatg
gttgagcgcgaaacaccagaagtttgggatatcttggctgacgtgattcgcgaacatcca
gtcatgctgaaccgtgcaccaacattgcaccgtttgggtattcaggcgttcgaaccacaa
ttgattgaaggtaaagcgattcagttgcacccacttgtgtgtgcggcatacaacgccgac
ttcgatggtgaccaaatggcggtacacgtaccgttaacaatcgaagcacagctagaagcc
cgtgctctgatgatggccaccaacaacgtattatcgcctgccaacggtgaacctatcatc
gttccttcacaggacgttgtattgggcttgtactggatgattcgtgatcgcatcaacgcg
aaaggtgagggcatgatgctcgccgatcttgatgaagtgactcgtgcttaccagactggc
gctgctcacctgcaagcaaaagttaaagtacgtatcaaagaaacgtctatcgacattaat
ggtggttctgaaaccatcactcgtgttgttgatacgacgattggtcgtgcattgttgttc
cgtattgtgccagacggcttatctttcgacttggttaaccaaccaatgaagaagaaggca
atctcaaacttgattaacacggcgtaccgtcgcgttggtctgaaagatactgttatcttc
gctgaccaagtgatgtataccggcttccagtttgcgactcgttctggttcgtctatcggt
gttaacgatttcgttatcccagatgaaaaagcggaaatcgttgctaacgcggatgcggaa
gtaaaagaaattgaaagccaattcgcttcaggtcttgtgacccacggcgaaaagtacaac
aaggttatcgacatttggtcgcgcgctaacgaattagtagcgaaggcgatgatggataac
ttgggtaaagaaaaggttattgaccgcgacggcaacgaagtggatcaagagtctttcaac
tctgtatacatgatggccgactcaggcgctcgtggtagcccggctcagatccgtcagttg
gcgggtatgcgtggtctgatggcgaaaccagacggttccatcatcgaaacgccaatcgtg
gcgaacttccgtgaaggtttgaacgtacttcagtacttcacctcgactcacggtgctcgt
aaaggtttggccgatacggcattgaagacagctaactccggttatctgactcgtcgtttg
gttgacgtagcccaagatttggttgttaccgaccgtgattgtggcactgagcacggctta
cagatgactccgctaattgaaggcggtgacgttgttgtggcattgggtggtcgtattctt
ggtcgtgttatcgcgactgacgtatacaagccaggcagtgttggcgatatcgtcgtgcca
gcgggtactttgattgatgaagcttgggtacaaaagatcgaagctgaaggtatcgacgaa
gtgaaggtgcgctctgcgattacctgtgaatcacgcgttggtatttgtgcggcttgttac
ggtcgtgaccttggtcgtggtcatcaggttaacgttggtgaagcagtcggcgttatcgct
gctcagtcgatcggtgagcctggtacacagttaaccatgcgtacgttccacattggtggt
gcggcatcacgttcttctgctgctgatagcgttcaagttaagaacaacggtaccgttcgt
ttgcataacttgaaaactgtaacgcgtgataacggcaacctagttgcagtatcgcgttca
ggttcgattgccttggcagacgaacacggtcgtgagcgtgagctatacaagctgccttac
ggcgcggttatcagtgttgttgacggcgaaaaagtacaagctggccagaaagtggcaagc
tgggatccacatactcacccaatcgtgaccgaagtaaaaggtcgtatcgaattcgtgggt
atggatgaaggtatcaccatcaaccgtcaaactgacgagttgacgggtctatccaacatc
gaagttattgatccaaaagatcgcccagcggcgggtaaagatattcgtccgatggttaaa
ctggttgatgcatcaggcaacgacgtttctctaccaggcacaaacgcaccagcacaatat
atgctgccgccgaatgccttggttaaccatgagaacggtactgaagtatcagtgggtgac
atcattgcgcgtatcccacaagaaacctctggtaacaaggacatcacgggtggtctgcca
cgcgttgctgacttgttcgaagcacgtaagccgaaagagcctgcaattcttgcagagatc
accggtactgtgagcttcggtaaagaaaccaaaggtaagaagcgtttggtaattactccg
aacgatggtggtgacgtttatgaagaactgatccacaagtggcgccacatgaacgtgttc
gaaggtgaacaggttgagaagggtgaggttatttccgatggtccgatgaacccacacgat
atcttgcgtctgcaaggtgtaggtcaattggccatgtacatcactaacgaagtacaggaa
gtttaccgtctacaaggcgttggcatcgatgacaaacatatcgaagttatcgttcgtcaa
atgttgcgtaaggttctaatccatgaaaatggcgacagctctttcattccgggtgatcag
gtggaatacaccaattacctaactgaaaatgagaagttggtagaagctggcaagattccg
gcgaagagcgagcgcgtgctattgggtattaccaaagcatcgttggcaaccgaatcgttt
atctctgcggcatcgttccaggaaacaactcgtgtactcaccgaaggtgcagtaaccggt
aaagttgataacttgcgcggtctgaaagaaaacgtggttgtgggtcgtttgatccctgct
ggtacaggtttggcttatcacgctgatcgtaagcgtaagcgcctgaatcgcgataacgaa
cgtcgtaaagcattgccagaaggtctcagcgtttcagctgaagacatggaagcaaaactg
agcgaagcgttcagcgataaataa |
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