KEGG   Tateyamaria omphalii: BWR18_00010
Entry
BWR18_00010       CDS       T04652                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
tom  Tateyamaria omphalii
Pathway
tom03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BWR18_00010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tom03400]
    BWR18_00010
DNA repair and recombination proteins [BR:tom03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BWR18_00010
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BWR18_00010
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H AAA_22 DUF87 Kinesin AAA eIF3_p135
Other DBs
NCBI-ProteinID: APX10261
UniProt: A0A1P8MQG3
LinkDB
Position
complement(34..2238)
AA seq 734 aa
MAYAHTDSSDPVTYLANPAEDVRTRLKLEGGKQLVMNTEFKPAGDQPTAIKELSAGVMSG
DRDQVLLGATGTGKTYTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVS
YYDYYQPEAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSV
ETYGAMTQDLKVGTEYDQRQVMADLIAQQYRRNDQAFQRGSFRVRGDSLEIFPAHLEDRA
WKLSFFGEELESITEFDPLTGEKAASLEHIRVYANSHYVTPKPTMNQAIIGIKKELKIRL
DQLVGEGKLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPD
NAIVFADESHVSVPQIGGMYKGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVF
VSATPAAWEIEQTGGVFTEQVIRPTGLLDPPVEIRPVEMQVDDLLDEVQKVAKQGMRTLC
TTLTKRMAEDLTEYMHEQGIRVRYMHSDIDTLERIEILRDLRLGAFDVLIGINLLREGLD
IPECGLVAILDADKEGFLRSETSLVQTIGRAARNADGRVIMYADKITGSMERALAETNRR
RAKQMAYNEEHGITPETVKKNVEDVLAGLYQGDTDQSRVTAKIDAPLAGGNLQAVLDGLR
ADMRKAAENLEFEEAARLRDEVKRLETVDLVVADDPLARQYAVEKAVDDAQKASGRSTAG
RAGQRGGNVKRRKR
NT seq 2205 nt   +upstreamnt  +downstreamnt
atggcctacgcacacaccgattcctccgatcccgtcacctacctcgccaacccggctgag
gatgtccgcacccgcctcaagctggaaggcggcaagcagctggtgatgaacacagaattc
aaacccgcaggcgaccagcccaccgcgatcaaggaactcagcgccggcgtgatgtcaggc
gaccgcgaccaggtcctgctgggcgcgacgggcacgggcaaaacctacaccatggccaag
gtgatcgaggaaacgcagcgccccgccatcatcctcgccccaaacaaaacgcttgcggcc
cagctctatggcgaattcaaagggttcttccccgacaacgccgtcgaatacttcgtcagc
tactacgattactaccagcccgaagcctatgtcgcccgctccgacacctacatagaaaaa
gaatcccagatcaacgaacagatcgaccgcatgcgccactccgccacgcgggcgcttctg
gaacgtgatgacgtgatcatcgtggcctccgtctcgtgcatctacggcatcgggtctgtc
gaaacctacggcgccatgacgcaggacctcaaggtcggcacggaatacgaccagcgccag
gtcatggccgacctcatcgcccagcaataccgccgcaacgaccaggccttccaacgcggc
agcttccgcgtgcgcggcgactccctcgaaatcttccccgcccacctcgaagaccgggca
tggaagttgtctttcttcggcgaagaactggaaagcatcaccgagtttgacccgctgacc
ggcgaaaaagcagcatcgctagaacatatccgcgtctacgccaactcgcactacgtgacc
ccaaaaccgacgatgaaccaggccatcatcggcatcaaaaaggaactcaagatccggctc
gaccaactggtgggcgagggcaaactgctcgaagcgcaacggctcgaacagcgcacgaac
ttcgatctggaaatgctcgaagccaccggcgtctgcaacggcatcgaaaactattcccgc
tacctcacgggccgcgccccgggtgaaccgccccccacgctgttcgaattcatccccgac
aacgccatcgtgtttgccgacgaatcccacgtctctgtcccccagatcggcggcatgtac
aaaggcgactaccggcgcaagttcacgctggccgaacacggcttccgcctgccgtcctgc
atggacaaccgccccctcaagttcgaggaatgggacgccatgcgcccccaatccgtcttc
gtctcggccacccccgcggcatgggagatcgaacaaacaggcggcgtcttcaccgaacag
gtcatccgccccaccggccttctagacccgcccgtcgaaatccgaccggtcgagatgcag
gtcgacgacctgctggacgaggtccagaaagtggccaagcaaggcatgcgcaccctctgc
accacgctgaccaagcgcatggccgaggatctgacggaatacatgcacgaacagggcatt
cgcgtccgctacatgcactccgacatcgacacgctggaacggatcgaaatcctgcgcgac
ctgcgcttgggcgccttcgacgtgctgatcggcatcaacttgctgcgcgaggggctcgac
atccccgaatgcggccttgtcgcgatcctcgacgcggataaggaagggttcctgcggtcc
gagacatccctcgtccagaccatcggacgggcggcaagaaacgccgacggccgcgtgatc
atgtacgccgacaagatcacaggctcgatggaacgggcgctcgccgaaaccaaccgccgc
cgcgccaagcagatggcctataacgaagaacacgggatcacgcccgagacggtaaaaaag
aacgtcgaagacgtgctggcaggcctctaccagggcgacaccgaccaatcccgcgtcacg
gccaagatcgacgcgccattggcgggtggcaacctgcaagccgtgctcgacgggttgcgc
gccgacatgcgcaaagcggcagagaacctagaattcgaagaggcagcgcggctgcgggac
gaggtcaaacggctcgaaacggtcgatctggttgtggcggatgatcccttggcgcgtcag
tatgccgtggagaaggcagtggacgacgcgcagaaggcatccgggcgttcgacggctggg
cgtgctgggcaaaggggtgggaatgtgaagcggcggaagcggtaa

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