Tateyamaria omphalii: BWR18_16290
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Entry
BWR18_16290 CDS
T04652
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tom
Tateyamaria omphalii
Pathway
tom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BWR18_16290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tom03400
]
BWR18_16290
Enzymes [BR:
tom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BWR18_16290
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BWR18_16290
DNA repair and recombination proteins [BR:
tom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BWR18_16290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF6815
Motif
Other DBs
NCBI-ProteinID:
APX13067
UniProt:
A0A1P8MYA0
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All DBs
Position
3250042..3250893
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AA seq
283 aa
AA seq
DB search
MPELPEVETVRRGLAPTMEGAVIAQADVNRPDLRWPFPAGMAERLSGQQVLGLRRRSKYI
LADLASGETLLIHLGMSGRMLVSGDPLGQFVHEHPMPEKHDHVVLHMDNGARITFNDPRR
FGAMDLMETATADQHKLLAVLGPEPLGNAFNEDHLIAAFDGKNTPVKSALLDQRIVAGLG
NIYVCEALYRAGISPTRKAGRIAPRRVGALVPIIRDVLAEAIEAGGSSLRDFRQADGELG
YFQHRFDVYGREGEPCRTPGCSRDVVRIVQSGRSSFYCRSCQS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagttgagaccgtccgtcggggccttgcccccacgatggagggc
gccgtgattgcccaggcggatgtgaaccggcccgatctgcggtggccgtttcctgctggt
atggcggagcggttgagcgggcagcaggtgctggggctgcggcggcggtcgaaatatatc
ttggcggatctggcgtcgggcgagacgttgttgatccacctgggcatgtcagggcggatg
cttgtctcgggtgatccactggggcagttcgtgcatgagcatccgatgcccgaaaaacat
gaccatgtggtgctgcacatggacaacggggcgcgcatcaccttcaatgatccgcggcgc
tttggggcgatggacttgatggagacggcgacggcagaccagcacaagctgttggcggtg
ctggggccggagcccttgggcaatgcattcaacgaagatcacctgatcgccgcctttgac
ggcaagaacacgccggtcaaatccgcgctgctggatcagagaatcgtcgcgggattgggc
aatatctatgtctgcgaggcgctttatcgggcgggtatctcgcccacccgcaaggccggc
agaatcgcgccgcggcgcgtcggtgcccttgtcccgatcatccgcgatgttctggcagag
gcgatcgaggcaggcggatcaagcttgcgcgatttccggcaagccgatggagagcttgga
tatttccagcatcggttcgatgtttatgggcgcgaaggggaaccttgtcgcacgcccgga
tgttccagggacgtggtgcggatcgtgcagtcggggcggtcgtctttctactgcaggtcg
tgccaatcttga
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