Thermococcus onnurineus: TON_1042
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Entry
TON_1042 CDS
T00789
Name
(GenBank) DEAD/DEAH box RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ton
Thermococcus onnurineus
Pathway
ton03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ton00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TON_1042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ton03019
]
TON_1042
03009 Ribosome biogenesis [BR:
ton03009
]
TON_1042
Enzymes [BR:
ton01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TON_1042
Messenger RNA biogenesis [BR:
ton03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TON_1042
Ribosome biogenesis [BR:
ton03009
]
Prokaryotic type
rRNA helicases
TON_1042
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Cas3-like_C_2
Phage_integrase
DUF2278
P-loop_SecA
CMS1
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ACJ16530
UniProt:
B6YWR7
LinkDB
All DBs
Position
963130..964341
Genome browser
AA seq
403 aa
AA seq
DB search
MSFENLGLSEATLVAVRRKGFSQPTDIQKEVIPRLLSGDADIIGQSQTGTGKTAAFALPI
IEAIDEKEKSVQAIILAPTRELALQVADEIKSLRGRKRVYVYAVYGGQPIGPQIRALERG
THVVVGTPGRVLDHIRRGTLDLSKVKFFILDEADRMLDMGFIDDIEAIFRETPKKKRVLM
FSATMPREILRLARRYMNDYEVIKVSSDELVPGMVEQEYIEVVPARKFSTLKKILSDDFY
GIVFCATKRETRELSEKLRKQGYSAEALNGDMSQAARERTFWRFKTKRTRILVATDVAAR
GLDVQDISHIVNYSLPMTAEDYVHRIGRTGRMGKKGKAVTFIMPGEFKRLRYIASVAGVD
IQKSELSEELPREYHERYKREERPQRYRKNGRRDYSRGYSRRY
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgaaaacttaggcctatctgaggcgacgttagttgccgttaggaggaagggc
ttctcacagcccaccgacattcagaaagaggtcattccgcgtcttttatctggcgatgcg
gatataatcgggcagtcccagactgggaccggaaagacggccgcttttgccttgcccata
atcgaggcaattgatgaaaaggaaaagagcgtccaggcgattatcctggcgcccacaaga
gagctcgcccttcaggtggcagacgagataaagagcctccgcgggaggaagagggtttac
gtttacgcagtctatggcggccagccgattggtccgcagataagggcccttgagagaggt
actcacgtcgtcgttggcacccccggaagggttctcgatcatataaggcgcggaacccta
gatctgagtaaggtgaagttcttcatccttgacgaggccgacaggatgctcgacatgggc
ttcatagatgacatagaggcaatctttagggaaacaccgaagaagaagcgcgtgctgatg
ttctcggcaacgatgccgcgtgagattttaaggctggcgaggcgctatatgaacgattac
gaggtaatcaaagtcagcagcgacgagctcgttccagggatggtggagcaggagtacatt
gaagtcgtccctgccagaaagttctcaacccttaagaaaattctaagcgacgacttctac
gggatagtcttctgcgcgacgaagagggaaacacgggagctgagcgagaagctcaggaag
cagggctacagcgccgaagccctcaacggagacatgagtcaggcggccagagaaaggacg
ttctggcgcttcaagaccaagaggacaaggattctcgtagcgactgacgttgcagcgagg
ggcctcgacgtccaggacataagccacatagtgaactactccttgcccatgacggccgaa
gactacgtccacaggataggcagaaccggcaggatgggcaagaaaggtaaggcggtcacc
ttcatcatgcctggcgagttcaagaggctccgctacatagcaagcgtcgcgggtgttgat
atccagaagtccgagctcagcgaggagctacctagggagtaccatgagaggtacaagcgc
gaggagagaccacagagataccggaaaaacggaagaagagactactcccgcggctattca
aggcgctactga
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