Tetragenococcus osmophilus: C7K38_06435
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Entry
C7K38_06435 CDS
T05711
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
too
Tetragenococcus osmophilus
Pathway
too03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
too00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7K38_06435 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
too03019
]
C7K38_06435 (pnp)
03016 Transfer RNA biogenesis [BR:
too03016
]
C7K38_06435 (pnp)
Enzymes [BR:
too01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C7K38_06435 (pnp)
Messenger RNA biogenesis [BR:
too03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C7K38_06435 (pnp)
Transfer RNA biogenesis [BR:
too03016
]
Prokaryotic type
tRNA degradation factors
C7K38_06435 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
Lys_Orn_oxgnase
S1_RRP5
SPATA25
S1_2
KH-I_KHDC4-BBP
DUF6620
Motif
Other DBs
NCBI-ProteinID:
AYW48034
UniProt:
A0AA38CYN0
LinkDB
All DBs
Position
1327195..1329339
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AA seq
714 aa
AA seq
DB search
MTKQVFETTWGGRPLQVEVGQLAKQANGAVLVRYGETVVLSAVVASKEAKGTDFFPLTIN
YEEKMYAVGKIPGGFIKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVTNTVMSVEQ
DCSPAMAAMLGSSLALTISDIPFDGPIAGVEVGRVDGEYILNPTVEQHEQSDIDLTVAGT
ADAINMVESGAKEVTEADMLGALMFGHSAIQEIVAFEEEVKASCGKEKMDISLLQVDEDL
QKTIYDAYYQTMKTAVLTEEKLAREDEIENVKATVKEAYEEQIAALEDDKAEYLAQEVDQ
IAEDLEKDVVRELITIDKIRPDGRKVDEIRSLSSEVGMLPRTHGSGLFTRGQTQALSVCT
LAPLGEHQVIDGLGVEESKRFIHHYNFPKFSVGSTGRAGSPGRREIGHGALGERALSQVI
PSEETFPYTIRLVAEVLESNGSSSQASICAGTLALMDAGVPIKAPVAGIAMGLVSDGENY
TILTDIQGMEDHLGDMDFKVAGTKDGITALQMDIKIQGITEQILREALAQAKQARMEILQ
ELTTTIAQPREELSTYAPKIEMISIDPEKIKDVIGKGGDVINGIIDETGVKIDIDQEGNV
SLASSDAEMIKKAASIIKDLTKEIKPGEVYLGKVVRIEKFGAFVNIAKGKDGLVHISQIA
NERINKVEDVLHVGDEVLVKVTEIDKQGRINLSRKAMLKDDESDGNKDNNSAKK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaagtttttgaaacaacttggggaggccgacctctacaagtagaagtggga
caacttgctaaacaagcgaatggcgctgttttggttcgctacggtgaaacagtagtgtta
agtgcggtagtggcatctaaagaagcaaaaggtacagactttttcccactaaccattaat
tatgaagaaaaaatgtatgccgtaggaaagataccaggagggtttattaaaagagaaggc
cgacctagcactgatgctacgttaacggctcgtttaatcgaccgacctatacgcccaatg
tttgctgaaggttttcgtaatgaggtccaagtaacaaacactgtgatgagtgtagaacaa
gactgttctcctgcaatggcagcgatgctaggttcttctttagctttaaccatctcagat
attccgtttgatggtcctattgctggggtagaagttggacgtgtagatggtgagtatatt
ttaaacccaactgtagaacaacacgaacaatcagatatcgacttaacagttgctggaacg
gctgatgcgattaacatggtagaatcaggggcaaaagaagttactgaagcagatatgtta
ggtgctttgatgtttggccattctgctatccaagaaatcgtagcatttgaagaagaagtt
aaagcaagctgtggtaaagagaaaatggatatttctttgttacaagtagatgaagattta
caaaaaacgatttatgacgcttattatcaaacgatgaaaacggctgttttaacagaagaa
aaattagcgcgtgaagacgaaattgaaaatgtaaaagctacggttaaggaagcttatgaa
gaacaaattgccgcattagaagatgataaagcagaatatttagctcaagaagtagaccaa
atcgcagaagacttagaaaaagatgtggtacgtgaattaatcactattgataaaattcgc
ccggacggaagaaaagtagatgaaatacgttctctttcttccgaagttggaatgttacct
cggacgcatgggtcagggttatttactcgagggcaaacacaagctttatccgtttgtact
ttagctcctttaggtgaacaccaagttattgatggtttgggtgtggaagaatccaaacgt
tttattcatcattataatttccctaaatttagtgtgggatcaaccggacgtgcaggttcc
cctggccgaagagaaattggtcatggagctttaggtgaacgggcattatctcaagttatt
ccaagtgaagaaacatttccttatacgattcgtctggtagctgaagttttagaatctaat
ggttcttcttctcaagcaagtatttgtgcaggtacccttgctttgatggatgctggcgtg
ccaatcaaagccccagttgctggtattgctatgggattagtttcagatggtgaaaattat
acaattttgactgatattcaaggcatggaagaccacttaggcgatatggactttaaagtt
gctggtacaaaagatggtattacagctttacaaatggacattaaaattcaaggtattact
gaacaaattttgcgtgaagctttagctcaagctaaacaagcacgtatggaaattttacaa
gaattaacaacaacaatcgctcaaccaagagaagagttaagtacttatgctcctaaaatt
gaaatgatttcaattgatcctgaaaaaatcaaagacgttatcggaaaaggcggagatgtc
attaacggtattattgatgaaacaggagtgaaaattgatattgatcaagaagggaatgtt
tctcttgcttcttctgatgcagaaatgattaaaaaggctgcatcgattattaaagatcta
actaaagaaataaaaccgggagaggtttatttaggtaaggttgtccgtattgaaaaattt
ggtgctttcgttaatattgctaaaggtaaagatgggctagtccatatttcgcagatagca
aatgaaagaataaataaagtagaagacgttcttcatgtgggtgatgaagtgcttgttaaa
gtgacagaaatcgataaacaaggacgtatcaatctttctagaaaagctatgttaaaagat
gatgaatcagatggcaataaagataataatagcgccaaaaaataa
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