Tetragenococcus osmophilus: C7K38_06950
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Entry
C7K38_06950 CDS
T05711
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
too
Tetragenococcus osmophilus
Pathway
too03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
too00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C7K38_06950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
too03400
]
C7K38_06950
Enzymes [BR:
too01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C7K38_06950
DNA repair and recombination proteins [BR:
too03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C7K38_06950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
AAA_22
AAA_29
HHH
UvrD_C
UvrD-helicase
SLFN-g3_helicase
NPHP3_N
nSTAND3
AAA_28
AAA_12
T2SSE
AAA
AAA_16
NTPase_1
AAA_23
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AYW48131
LinkDB
All DBs
Position
1437563..1440100
Genome browser
AA seq
845 aa
AA seq
DB search
MKGATCPLPEEWYIIGKIAAVFFRNPNNFYKVLLVKISETNMDSTAKEIVVTGSFGEIQE
EELYRFFGEPVVHPKYGEQFKANAYQKEQPTSENGLIYYLSSDNFPGIGEKTAEKIVDLL
GEDAIDKILDEPTLLEQISGLNKKKREMLVDTIRLNYGMDKAIVGLNRYGFGSQLAFAIY
QTYKNETLEIIEENPYQLVEDIEGIGFKKADNIAEQLGIDATSDKRIRAAILHQILQQSM
ETGNTYIAAKELLEQVLHMLEDSRPVEIDPEKVANGVIELVEEGKIQQEETNLFENSLYF
AEWGIASSIQRLLQQQKEINYSEEKLNKNLRKLEKRLDIVYGDSQEEAIKKAIRSPLFLL
TGGPGTGKTTVIDGIVQLFAELNDISLDPSQYSEETFPVLLAAPTGRAAKRMNETTGLPS
STIHRLLGLNGRENKAKNTDPKELEGGLLIVDEMSMVDTWLANTLFKAIPDSMQVIFVGD
KDQLPSVGPGQILHDLLNIPDIPQKELTEIYRQGDGSSIISLAHEIKNGALPEDFTQNQN
DRSYFACQAQQIEPLISKVATKAKQKGFTPQDIQVLAPMYKGPAGINALNKMMQEIFNPN
VDQTKKEVSFNNVVYRIGDKVLQLVNAPEDNVFNGDMGEITGIIYAKDSEDKVDELVIAF
DANEVKYKRNEWNKITLSYCCSIHKAQGNEFKMVILPMVNQYSRMLQRNLLYTAVTRSKE
MLILLGELSAYQRCVEQVSTLRLTALKERINGIDSISQAMRLKISTYENEQEEAPFEKEH
KAVKNSKPKIESDSAKVESFDLFAQETPAPSGPIQLTPELIQNHAIDPMIGMGEISPYDF
QVTQK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggagcgacatgtccgttgccagaagaatggtatattattggtaaaatcgcggca
gttttttttagaaatcctaataatttttataaagtactcttagttaaaatttcggaaaca
aatatggattctactgctaaagaaatcgttgttacgggtagttttggtgagatccaagaa
gaagaactgtaccgtttttttggagagcccgtcgttcatcccaaatatggtgaacagttt
aaagctaacgcttaccaaaaagaacaaccaacttcagaaaatgggcttatctattatctt
tcaagtgataattttccaggtattggagaaaaaacagcagaaaaaattgtcgatcttttg
ggcgaagatgctattgataagatcttggatgaaccaacgttgttagaacaaatttctggg
ctaaataaaaaaaagcgagaaatgttagtagatacgatacgtttaaattacggcatggac
aaagcgatcgtgggtttaaatcggtatggttttggaagtcaattagcgtttgctatttat
cagacttataaaaacgaaactttagagatcatcgaagaaaacccttatcaattggtggaa
gatattgagggtatcggttttaaaaaggcggataacattgccgaacaattggggattgat
gctacttctgataaaagaattcgtgctgctattttacatcaaatcttgcaacaatcgatg
gaaacgggaaatacttatattgcggctaaagagttattagagcaagttttacatatgtta
gaagatagtcgtcctgtagaaattgatccagaaaaagttgctaacggagtaatcgaatta
gtagaagagggaaaaattcaacaagaagaaactaacttgttcgaaaatagcctatatttt
gctgaatggggaatagcttcaagtatccaacgcttattacaacaacaaaaggaaatcaat
tattccgaagagaagttaaataaaaatctacgtaaattggaaaaacgtttggatattgtt
tacggcgattcccaagaggaagcgataaaaaaagcgatacgatctccgttgtttttatta
acaggggggcctggaacagggaagaccacagttatcgatggtattgttcaattatttgct
gaattaaatgatatctctttagacccgagtcaatactcagaagaaacttttcctgtgtta
ttagcggcacctaccggacgcgctgccaaacgtatgaatgagacaacgggcctacctagt
agtaccattcatcgtttattaggtttaaatgggcgggaaaacaaggcaaaaaatactgac
cctaaggaacttgagggtgggcttttaattgttgatgaaatgtccatggtggatacttgg
ttggccaatactttgtttaaagctattcctgatagtatgcaggttatttttgtaggcgat
aaggatcaacttccttccgtaggaccagggcaaattttgcatgatctattgaatatccca
gatattcctcaaaaagaactaaccgaaatctatcgtcaaggagacggttctagtattatt
tctttagctcatgaaataaaaaatggagcgttacctgaggatttcacccaaaaccaaaac
gatcgttcttattttgcttgccaagcgcaacaaattgagcctttaatctctaaagtagct
acaaaagcgaaacaaaaaggctttacaccgcaagatatacaggttttagctcctatgtat
aaagggccagccggtattaacgccttaaataaaatgatgcaagaaatcttcaatccgaat
gtagatcagacaaaaaaggaagtttcatttaataatgtggtttatcgtattggcgataag
gttcttcagctggttaatgcccctgaagataatgtatttaatggggacatgggagaaatc
acggggatcatttatgcgaaagattccgaagacaaagtggatgaactagttattgctttt
gacgcaaatgaagtgaaatataaacgtaatgaatggaataagatcactttatcttattgc
tgctcgattcataaagctcaaggcaatgagtttaagatggttattttgccgatggttaac
cagtattctagaatgcttcagcgcaatttattgtatacagctgtgacgcgaagtaaagaa
atgctaattttactaggggaattgtctgcttatcaaagatgtgtagagcaagtgtcgact
ttacgcttaactgcgcttaaagaacgaattaacgggattgattcgatttctcaagctatg
cgattaaaaatttcaacttacgaaaatgaacaggaagaagctccctttgaaaaagaacac
aaagcagtaaaaaatagtaaacctaagatagaatccgactcagctaaagtggagtctttt
gacttgtttgcgcaagagacgccagctccttctgggccgattcaattaacgccagaactg
atacaaaatcatgcgattgatccaatgattggtatgggggaaatatctccttatgatttt
caagtaacacaaaaataa
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