Tetragenococcus osmophilus: C7K38_08905
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Entry
C7K38_08905 CDS
T05711
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
too
Tetragenococcus osmophilus
Pathway
too03420
Nucleotide excision repair
too03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
too00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C7K38_08905
03430 Mismatch repair
C7K38_08905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
too03400
]
C7K38_08905
Enzymes [BR:
too01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C7K38_08905
DNA repair and recombination proteins [BR:
too03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C7K38_08905
MMR (mismatch excision repair)
Other MMR factors
C7K38_08905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_16
AAA_30
UvrD_C_2
AAA_12
NACHT
DUF3972
zf-C2H2_aberr
Motif
Other DBs
NCBI-ProteinID:
AYW48470
UniProt:
A0AA37XKG8
LinkDB
All DBs
Position
complement(1823250..1825535)
Genome browser
AA seq
761 aa
AA seq
DB search
MNERQYEEKHLAQTISLIKNENQMLKDQQNELQQSMQNQLKEVAENTINTATEESFYESV
VEYRQHEHELTLRYQSAEAKAKRLNTLQTMAQSPYFARIDFKEDQEPTETLYLGIASLRD
KDDNTIIIDWRAPIANLYYEGELGEAYYTANKEKFSVELLLKRQFKIQNGQLLSMVDTSE
MINDDFLLDILDETSSPQMKNIVSTIQKAQNRIIRDTTSKYMVIEGIAGSGKTSALLQRV
AFLLYHHRNWLNVDQVLLFSPNHLFSDYISMVLPSLGESEVPTQTFTYFLQKLVPRYTIR
NAAQEEDQFLSGENYPIQKLKNGLTALEQIPSYVASITDFGPIFRDLKINDQIYIQKKQI
RKWYKQTNSVLPLYQRIQLLQTKLLKKIGGLQKEEAKKEWAKNRASEKVEEIYENNPNLE
DTEEKEKQLTKQVKQDLVKKKFRPLVKQVNDYRFINFAKQYIHFLQEFPTEILQKYNISA
ESWEDSIQSIRQQMKNKEMLQEDALLYFSLLKDIYPVNIEQKVRFIFIDEMQDFPPAQAA
LLKQLFPRASMTLCGDLNQKVFGNETIVNSLDELFEQEEVTRYQLTTSYRSTKEITAFAN
QFLSQEDQVQTTARNGKKPLLVNASDQTQAVDWLTKDLFDNSKQKAQWRTAIIGKTTKEC
EALYELLVDSTKKQIQLITSEDEFMKRSIIIIPAYLAKGLEFDRVYAWHVAENFSVNDQL
ILYTIATRAMHELNIITYGQESPLLGNLVADTYQQKDIKGN
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacggcaatacgaagaaaaacatttagcacagaccatttctttaattaaaaat
gaaaatcaaatgttaaaagatcaacaaaatgaattacaacagtcaatgcaaaatcaatta
aaagaagtcgccgaaaatacaattaatactgcaacggaagaatctttttatgaatctgtc
gttgaatatcgccaacacgaacatgaattaacgctacgttatcaaagcgcagaagcaaaa
gccaaacgactaaacacactacaaactatggcccaatccccttactttgcacgaatcgac
tttaaagaagatcaagaaccaacagaaactctgtatttaggaatcgcttctttacgggat
aaagatgataatactatcatcatcgattggcgcgctcctattgctaatttatattacgaa
ggggagctgggagaagcttattatacggcaaataaggaaaaatttagtgtcgaattatta
ttaaaacggcaattcaaaatccaaaatgggcaactactttcgatggtagacacgtcagaa
atgattaatgatgatttcttactagatattttagatgaaacatcttctccacaaatgaaa
aatattgtttctaccatccaaaaagcgcaaaacagaattattcgagatacaactagtaaa
tatatggtaattgaagggattgctggcagtggaaaaacttctgcgttactgcaacgtgtc
gcctttttattatatcaccatcgtaattggttaaatgtcgatcaagtgttactattttct
cctaaccatctattttcagattatatctccatggttttaccttctttaggagaaagcgaa
gtacccacacagacatttacctattttttacaaaaactagttcctaggtatacgattcga
aacgcagcacaagaagaagatcaattcttaagtggagaaaattatcctattcaaaaattg
aaaaatggactaaccgctttagaacagatcccatcttatgttgcttctatcactgatttt
ggacctatttttcgtgatttaaaaataaatgaccaaatctatattcaaaaaaaacaaatt
cgtaaatggtataagcagacaaattcagtattacccctttatcaacgaatacagcttttg
caaacaaaactgttgaaaaaaattggtggtctacaaaaagaagaagctaaaaaagaatgg
gctaaaaaccgtgcctcagaaaaagtcgaagagatttatgaaaataatcctaaccttgaa
gacacagaggaaaaagaaaaacaactcacgaaacaagtaaagcaagatctagtgaaaaag
aaatttcgcccgttagtaaaacaagttaacgattatcggtttatcaattttgctaagcag
tatattcactttttacaagaatttccgacagaaattttacaaaaatacaatatttctgcc
gaaagttgggaagatagtatacaaagtattcgtcaacaaatgaaaaataaggaaatgctg
caagaagatgctttattatatttttctcttttaaaagatatttatcccgtaaatattgaa
cagaaagtccgttttatttttatcgatgaaatgcaagattttcctcctgcacaagctgcc
cttttaaaacagcttttcccaagagcatcgatgacattgtgcggggatttaaaccaaaag
gtgtttggtaatgagaccatcgtcaactctcttgatgaattatttgagcaagaagaagtt
acgcgttatcagttaaccacaagttatcgctcgacaaaagaaatcactgcttttgccaac
caatttttatcgcaagaagatcaagtacaaacgaccgcaagaaatgggaagaagccttta
ctagttaatgcctctgaccaaactcaagcagttgattggcttactaaggatttgtttgat
aattccaaacaaaaggcccaatggcgtactgctattattggaaaaacaacaaaagagtgt
gaagcattatatgaattacttgtagattcaactaagaaacaaattcaattgattacttct
gaagatgagtttatgaaacgttcaattatcatcatccccgcctatttagctaaggggtta
gaatttgaccgcgtttatgcttggcatgttgcagaaaatttctcagtaaacgatcagctg
attctttatacgatcgctacccgtgctatgcatgaactaaatatcattacttatggacaa
gaaagcccattattgggaaatcttgttgcagacacttatcaacaaaaagatataaaagga
aactaa
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