Tetragenococcus osmophilus: C7K38_09030
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Entry
C7K38_09030 CDS
T05711
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
too
Tetragenococcus osmophilus
Pathway
too03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
too00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C7K38_09030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
too03400
]
C7K38_09030
DNA repair and recombination proteins [BR:
too03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C7K38_09030
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7K38_09030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_7
AAA_30
AAA_19
Microtub_bd
AAA_22
Kinesin
AAA_25
T2SSE
AAA_5
AAA
UB2H
Motif
Other DBs
NCBI-ProteinID:
AYW48494
LinkDB
All DBs
Position
1850855..1852840
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AA seq
661 aa
AA seq
DB search
MIEKELSHQFELVSNYQPSGDQPEAIEALTDGVLDHKKAQILLGATGTGKTYTISNVIQN
VNKPTLIIAHNKTLAGQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSI
NDEIDKLRHSATSSLLERNDVIVVASVSCIFGLGSPMEYQKQVVSLRQGMEISRDELLRS
LVDIQFERNDIDFQRGRFRVRGDVVEIFPVSRAEQALRIEFFGDEIDRIREVDALTGEVL
NETEHVSIFPATHFVTDEDHMETAIASIKQELETRLEILKNDNKLLEAQRLEQRTNYDIE
MLREMGYTSGIENYSRHMDGREEGEPPYTLLDFFPEDSLYVIDESHVTMPQIRGMYNGDR
ARKQMLVDYGFRLPSALDNRPLRLEEFEKHVNQIIYVSATPGPYEKDQTDTVVEQIIRPT
GLLDPLIEVRPIMGQIDDLVGEINNRIENDERVFVTTLTKKMAEDLTDYFRELGIKVKYL
HSDIKTLERTEIIRNLRLGEFDVLVGINLLREGLDVPEVSLVAILDADKEGFLRSERSLV
QTMGRAARNAEGKVVMYADQITDSMQNAMDETSRRRKIQEEYNEEHGIVPQTIKKDIRDL
ISISSTSEEGGEKEEVSYENLTQDEKEDLIEKLDAEMKEAAKSLDFEKAATLRDSILELK
A
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaaagaattatcacatcaatttgaacttgtttcaaattaccagccgtcagga
gatcagcccgaagcaattgaagcattaactgatggggtgttagatcataaaaaagctcaa
attcttttaggggctactggaacagggaaaacatatacgatttcaaacgtcattcaaaat
gtaaacaaacccacattaattattgcgcataataaaacattagcagggcagttgtatggt
gaatttaaagaatttttccctaacaatgctgttgaatactttgtaagttattatgactac
tatcaacctgaagcttatgtgccatccagcgatacttatatcgaaaaagattcgagtatc
aatgatgaaattgataaactacgtcattcggctacaagttctttattagagcgtaatgat
gttatcgtggtcgcttcagtatcatgtatttttggtttaggatctccaatggaatatcaa
aaacaagttgtttccttacgtcaaggtatggagatttctagagatgaattgttgcgttcg
ctcgttgatattcaatttgagcgtaatgacattgattttcaacgtggacgttttcgtgtg
cgcggcgatgtggttgaaattttcccagtgtcacgagctgaacaagcattacgcattgaa
tttttcggcgatgaaattgaccgtattcgtgaagtagatgcacttacaggagaagtttta
aatgaaactgaacatgtatctattttcccagcaactcactttgttactgatgaagatcat
atggaaacagctattgcttcaataaaacaagaattagaaactcgtttagaaattttgaaa
aatgacaataaattgttagaagcacaacgcttagaacaaagaacaaattatgatattgaa
atgttacgagaaatgggttatacgtcaggtattgaaaattactcaagacatatggacggt
agagaagaaggcgaaccaccatatacacttctagactttttccctgaggattctttatat
gtaattgatgaatcccacgttactatgccacaaattcgagggatgtataatggggaccgt
gctaggaagcaaatgctagtggactatggcttccgcttaccttcagctttggataaccgg
ccattgagacttgaggaatttgaaaaacatgtaaatcaaattatttatgtttcggcaaca
cctggtccttacgaaaaggatcaaacagatactgttgttgaacaaattattcgcccaaca
ggtcttttggacccattgattgaagtacgaccgattatgggacaaattgatgatctcgtt
ggagagatcaataatcgcatagaaaatgatgaacgtgtttttgttactactttgactaag
aaaatggcagaggacttaactgattatttccgcgaattaggaataaaagtgaagtatttg
catagcgatattaaaacattagaaagaacagaaattattcgaaacttgcgcttaggtgaa
tttgatgttttagtaggaattaacctattaagagaaggtctagatgtaccagaagtttcc
ttagtagctattttggatgctgataaagaaggatttttacgtagtgaacgttctcttgtt
caaacaatgggacgggcagctagaaatgctgaaggaaaagtagtaatgtatgctgatcaa
atcacagactccatgcaaaatgctatggatgaaacaagtcgtcgtcgtaaaattcaagaa
gaatataatgaagaacatggtattgtaccacaaacgatcaaaaaagatattcgcgacttg
atctcaatttcttctacttctgaagaaggaggagaaaaagaagaggtatcttatgaaaac
ctcacacaagatgaaaaagaagacctaattgaaaaattagatgcagaaatgaaagaagct
gctaagtcattagatttcgaaaaagcagctactttacgtgattcaattttagaattgaaa
gcttaa
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