Tetragenococcus osmophilus: C7K38_09100
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Entry
C7K38_09100 CDS
T05711
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
too
Tetragenococcus osmophilus
Brite
KEGG Orthology (KO) [BR:
too00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
too03400
]
C7K38_09100 (addA)
Enzymes [BR:
too01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C7K38_09100 (addA)
DNA repair and recombination proteins [BR:
too03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C7K38_09100 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
ResIII
NPHP3_N
AAA_16
DUF2059
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AYW48506
UniProt:
A0AA38CWE5
LinkDB
All DBs
Position
1870427..1874098
Genome browser
AA seq
1223 aa
AA seq
DB search
MVDIPLKPKNETFTDKQWQAVFDSGDNLLVSASAGSGKTSVLVRRVIEKLKNGSNIDELL
IVTFTEAAAREMKERIQQALQDAINKESQQERRNHFVKQLTLLPRAPISTLHAFCLTVIR
RFYFLIDLDPVFRMLTDDTERLLLKEEVWEELSESYFDSSDQEFYRLAENFSSDRSDDGF
TDLIMSLYDFAKASPNTVDWLNQLPQSYDTTQGLVGNKLYQNQVKPLILANLQTAIDQQK
TALEIAQNTGSMEKAESLLDNELKQARRLWSYVKEDNVQEAYEQLSAFDFQRYPTFNKQE
ELKEISEDSIKPRRNSAKDLIKETETYFAQSPEKMLELMNYAKPLVKKMGEVTLNFIEKY
QERKQVKGVLDFNDLEHFALDILRGNGEGSEASNYYRDRFEEVLVDEYQDTNRLQEAILF
WLCNPEPEYGNLFMVGDVKQSIYAFRLADPTLFVDKYSAFAYNEGGRRIILAENFRSRKE
VLQFTNLVFEQLMDETVGQIPYDGAAQLVPGLSLFPASEDFNTELLLYEKEVEEDPTVVD
DKTEGELYLVALKIKKLVESKFMIYDKKQKENRPITYDDIVLLTPTRKNNLVIMDVFKQF
QIPLEVNDAQNYFQATEVQIMVSLLEIIDNPYQDIPFAAVLRSAIVGLNEEELTKVRLAK
KEGYYYEAFLAYLENDDELAKRLRSFNEQLESWRSLSRRRALSELIWTIYQETAYLDYVI
GLASGRQRYANLVALAHRAETYEQSSFRGLYQFIRFIEKMQEKDKDLAEPLALSQEDAVR
VMTIHASKGLEFPVVFLLDMTKQFNYSDFTTRYIFEEKLGAGIQYIDQEQVCYDTLPYQA
IKQQRIKKMLSEEMRKLYVALTRAEQKLYLVGSYKTKEEAIKSWQKALDQESKVLDPALR
LKGKGNLMDWVGMTLIRHPDMQNYIQAVSKKTIDHPAHFEIHWSNQAQLAEAIKEYQRPE
TQKQRLTSPEKTEVNELQQRLNFVYPMQKSTKTTSYQSVSEMKRLYNDPDEQQLNKISWE
STLEQQQNQHYRYVTEELAKPKFMQEEKVDAATIGSATHNLLQLLPLTTPPTFDSIQQRL
AKLVEQQQIESQVAEKIDLSAILWFFQTELGRKILATPELVHREQPFSMLKDAREVFLDF
DEADAELLIHGIVDGYIEYEDYVILYDFKTDVVYNEQRKQELISNYQGQLRLYREALAQA
LNKPVLNTFLILLNHKEIIEMTT
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggttgatattcctttaaaaccaaaaaatgaaacatttacggataaacaatggcaagca
gtatttgattcgggagataatctacttgtctcagcttcagctggatcaggaaaaacctct
gtcttggttcgtcgcgtaattgaaaagttaaaaaatgggagtaacattgacgaactacta
atagtgactttcacagaagctgcagctcgagaaatgaaggaacgtattcaacaagcctta
caagatgcaattaataaagagagccagcaagaaagacggaaccactttgtaaaacagtta
acgttactaccacgagcgcctatttctaccttacatgcgttttgtctaacggttattcga
cgtttttattttttgattgatttagatccagtctttcgtatgttaacggatgatacagaa
cgcttattgttaaaagaagaggtttgggaggagttaagcgaaagctattttgattcttct
gaccaagaattttatcgtctagcagagaatttttctagcgatcgttcagatgatggtttt
actgatcttattatgtctttgtatgattttgctaaggcaagccctaatactgttgattgg
ttaaatcaacttcctcaaagttatgatactacacaaggccttgtgggaaataaactgtac
caaaatcaagtgaagcctcttattttagcaaacttacagacagctatcgatcaacaaaaa
acagctttagaaatcgctcaaaatactggttcaatggaaaaagcagaatcattattagat
aatgagctcaaacaagcacgtcgtttatggtcttatgttaaggaggataatgtccaagaa
gcttatgagcaattgtcagcttttgattttcaacgttatccaacttttaataagcaagaa
gagttaaaagaaatttcagaggattcgattaaaccacgtcgtaatagtgcgaaagatctt
attaaagagacagaaacgtattttgcccaatcgcctgaaaaaatgctggagttaatgaat
tacgctaagccattggtgaaaaaaatgggtgaagttactttaaattttattgaaaaatat
caagaacgtaagcaagtaaaaggggtattggattttaacgaccttgaacattttgcttta
gatattttacgtgggaacggtgaaggaagtgaagcttccaattattatcgagaccgcttt
gaagaagttttggtagatgagtatcaggatacaaaccgtttgcaagaagcaattcttttt
tggctttgtaatccagaacctgagtacggcaatctatttatggtaggggacgtgaaacag
tcaatttatgcctttcgattagcagatcctacattgtttgtagataaatattcagctttt
gcttataacgaaggcggtagacgaattattctggctgaaaactttcgttcgagaaaagaa
gttttgcaatttactaacttggtttttgaacagttaatggacgaaaccgtgggccaaatc
ccttatgacggagcagcgcaattagtgccaggactttctttgtttcctgcaagtgaagat
tttaatacagaactccttttatatgaaaaagaagttgaggaagacccaacagttgtcgac
gataaaacggaaggggagctttatttagttgctttaaaaattaaaaaattggtcgaaagt
aaatttatgatttatgataaaaagcaaaaagaaaatcgaccgattacttatgatgatatc
gtcttgcttacaccaacacgaaaaaataatttggtgattatggatgtatttaagcaattt
caaatccctttggaagtgaacgatgcccaaaattatttccaagccaccgaagtacaaatt
atggtctctttattggaaattattgataatccttatcaagatattccttttgcagcagta
ttacgttcagcgattgtcggattaaacgaagaagaattgactaaggttcgtttagctaaa
aaagaaggatattattatgaagcatttttagcttatttggaaaatgatgatgaacttgct
aagcgactacgttcatttaatgaacaattagaatcttggcgttcgctttctagaagacgt
gctcttagcgaattaatatggacaatttatcaggaaacagcttatttagattatgtcatt
ggattagcctctggtagacaacgttacgctaatctagttgctctagctcaccgagctgaa
acttatgaacagagtagttttagaggattgtatcaattcattcgttttatcgaaaagatg
caagaaaaagataaagatttggcagagcctcttgccttatcacaagaagatgctgtgaga
gtaatgacaattcatgcaagtaagggcttggagtttcctgttgtttttcttttagatatg
acaaaacagtttaactatagcgattttactacacgttatattttcgaagagaagttagga
gctggtatccaatatatcgaccaagaacaagtatgttatgatactttaccatatcaagca
attaaacagcagcgtattaaaaaaatgctatctgaagaaatgcgtaaactctatgttgcc
ttaacgcgtgcagagcaaaaactttatctggttggctcctataaaacaaaggaggaagcg
ataaaaagttggcaaaaagctttggatcaagaaagtaaggtgttagatcctgccttacga
ttaaaagggaaaggaaacttaatggattgggtgggtatgactttaatacgacatccagat
atgcaaaattatattcaagcagttagtaaaaaaacgatagatcatccagctcattttgaa
attcattggagtaatcaagcgcaattagcagaagctataaaagaatatcaaagaccagaa
actcaaaaacaaaggttaacttccccagaaaaaacggaagtaaatgaactacaacaacgg
ttaaattttgtctatcctatgcaaaagtcaacgaagacgacaagttatcaatccgtttct
gaaatgaaacgtttatataacgatcctgacgaacaacaactaaataagatctcttgggaa
agcaccttagagcagcagcaaaatcaacattatcgatatgtcactgaagagttggctaag
cctaaatttatgcaagaagaaaaagttgatgcggctactataggaagtgcaacgcataac
ttattacaattgcttccattaactacgccgcctactttcgatagtatacaacaaaggctt
gcgaaattagtagaacagcaacaaatagaaagtcaggtggcagaaaaaatagatttatcc
gctattttgtggtttttccaaacagaattaggaagaaaaattcttgctacgcctgagtta
gtccatagagaacaacctttttcgatgttaaaagatgcgcgagaagtctttttagatttt
gatgaagcagatgctgagttactaattcacgggattgtagatggctatatcgaatatgag
gattatgttattttatatgactttaaaacagatgttgtgtataatgaacaaagaaagcaa
gaactaataagtaattatcaaggacaattgcgtctatatcgggaagctttagcacaagct
ttaaataaacctgtgttaaacacttttttaattctgttaaatcataaagaaattattgag
atgacaacttag
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