Tetragenococcus osmophilus: C7K38_09835
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Entry
C7K38_09835 CDS
T05711
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
too
Tetragenococcus osmophilus
Brite
KEGG Orthology (KO) [BR:
too00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
too03009
]
C7K38_09835
Enzymes [BR:
too01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
C7K38_09835
Ribosome biogenesis [BR:
too03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C7K38_09835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_15
Methyltransf_31
Cons_hypoth95
TRM5-TYW2_MTfase
MTS
RrnaAD
Methyltransf_25
PrmA
TRM
N6_N4_Mtase
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AYW48645
UniProt:
A0AA37XIW4
LinkDB
All DBs
Position
complement(2028361..2029728)
Genome browser
AA seq
455 aa
AA seq
DB search
MEAIPVKKNQELEMTIVDLSHLGMGVAKIDGYPIFIENALPQEKVQVKIVKVGKKFGFGK
MLSIIQTSPYRQTVENKDLIRTGIAPLSHLQYEQQLKFKQNQVENVLAKVAKMPEIHVEE
TIGSSFAFGYRNKAQIPVRKIDGILQTGFYRKNSHELVPLDHFYIQDPAIDAAIVIIREI
LQQFEVKAYNEREHSGFLRHIVIRRGSYSHEMMVVLVTRKKHFPQGEKIAQKIQEKLPEV
VSIIQNINFKQTNVILGEEERLLLGRSFIYDQLFDKTFRISAKSFYQVNTPQAEVLYQKA
FDLASLKQTDTVVDAYSGIGTIGLSLADKVAQVYGMEVTPQAVTDAQKNAKINEIDNAAY
VVGKAETVMPKWKEEGIKPNVIFVDPPRKGLDQTFIETACDMDPEKIVYISCNPATMARD
LQIFADKGYYTDNIQPVDLFPQTHHVETVMALKKR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggaagctattccagtgaaaaagaatcaggaactagaaatgacaatcgttgatttatct
catttaggtatgggagttgctaaaatcgacggataccctatttttattgaaaatgcttta
ccacaagaaaaggtgcaagtaaaaattgtcaaagtggggaaaaaatttggctttggaaaa
atgctctccattatccaaacgagtccctatcgacaaacagtggaaaataaagacttgata
cgaactggaattgctcctcttagtcacttacaatacgagcagcagttaaaatttaaacaa
aatcaagtagaaaatgtattagctaaagtggcgaaaatgccggaaatacacgttgaagaa
acaataggtagttcttttgcctttggctatcgtaataaagcccaaattccagtgcgtaaa
atcgatgggatattgcaaaccgggttttatcgtaaaaatagtcatgaattagttcctctt
gatcatttttatattcaagatccagcaattgacgcggctattgtaattattcgtgagata
ttgcaacaatttgaagtaaaagcctataatgaaagggagcatagcggatttttacgtcat
attgttattcgacgtggttcttattctcatgaaatgatggtcgtgcttgtaactcgtaaa
aagcactttccgcaaggggaaaagatcgcacaaaagattcaggaaaaattacctgaagtt
gtttccattattcaaaatattaattttaagcaaacaaatgtcattttgggagaagaagaa
cgtcttttattaggacgtagctttatttatgatcaactgtttgataaaacttttcgtatt
tctgctaaatccttttatcaagtaaatacaccacaggcagaagttttatatcaaaaagcg
tttgatttggctagcttaaagcaaacagatactgtcgtagatgcttattcaggcattggg
acaattgggctttcattagctgataaagtagctcaagtatacgggatggaggtaactccg
caagctgtaacagatgcgcaaaaaaatgctaagatcaatgaaattgataatgccgcatac
gtggtaggtaaagccgaaacagtgatgcctaaatggaaagaagaaggaataaaacctaac
gtcatctttgtcgatccaccacgcaaagggttagatcaaacatttattgaaacagcctgt
gatatggatccggaaaaaattgtctatatttcttgtaatccagctacaatggctagagac
ttgcaaatttttgcagacaagggttattacacagataatattcaaccagtggatctattt
cctcagactcatcacgtggaaacagttatggctctaaagaagcgttaa
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