Tetragenococcus osmophilus: C7K38_10025
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Entry
C7K38_10025 CDS
T05711
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
too
Tetragenococcus osmophilus
Pathway
too03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
too00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C7K38_10025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
too03400
]
C7K38_10025
Enzymes [BR:
too01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C7K38_10025
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C7K38_10025
DNA repair and recombination proteins [BR:
too03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C7K38_10025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
KH_SLS1_2
DZR
Motif
Other DBs
NCBI-ProteinID:
AYW48682
UniProt:
A0AA37XJ36
LinkDB
All DBs
Position
complement(2074479..2075324)
Genome browser
AA seq
281 aa
AA seq
DB search
MPELPEVETVKKGLLHLVQHKRIAEVIVRWPKIVEVPTVDEFCQNLIGEQIENIQRRGKF
LLFKLTHFDLISHLRMEGKYEYFPEEELVQVDKHTHVIFKFTDGSQLHYNDVRKFGRMIL
VEKDQGPLYKGIQKLGPEPTSDEFDLANFASNLQKSTSFIKPLLLNQKVVAGLGNIYTDE
ALWFAKIHPQQPASTLTHSQIEDLREAIIEVLGRAVKAGGTTIRSYKNALGEAGAFQLDL
MVYGKTDEPCPRCGTPIAKIQVGQRGTHLCPYCQKIRGQDS
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
ttgccagaattacctgaagtagaaacagtaaaaaaaggattgcttcatcttgttcagcat
aaaagaatcgccgaagtaattgttagatggcctaaaattgttgaagtgccaacagtggat
gagttttgtcaaaatttaataggagaacaaattgaaaatatccaacgaagagggaaattt
cttttgtttaaattgactcattttgacttgatttctcatttacgcatggaaggaaaatac
gaatattttccagaagaagagctggtacaagtcgataaacatacgcacgttatatttaaa
tttactgatggtagtcagcttcattacaatgacgtgcgaaaatttggtcgtatgatctta
gttgaaaaagatcaaggccctctttacaaaggaattcaaaaattaggcccagaacctaca
agtgatgaatttgacttagcaaattttgcatcaaatttgcaaaaatccacttcatttata
aaaccgttattgttaaatcaaaaagttgtggctggcttaggaaatatttataccgatgaa
gctttatggtttgcaaaaatccatccgcaacaaccggcatctacattaactcatagccaa
atagaagatctgcgagaagctatcattgaagttttaggtagagcagtaaaagcgggtgga
accacaattcgaagttataaaaatgctttaggtgaggccggtgcttttcaattggattta
atggtgtatggaaaaaccgatgagccatgccctcgatgtggcacaccaattgctaaaata
caagtaggccaaagagggacacatctgtgtccttattgtcagaaaataagggggcaagat
tcatga
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