Tetragenococcus osmophilus: C7K38_10375
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Entry
C7K38_10375 CDS
T05711
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
too
Tetragenococcus osmophilus
Brite
KEGG Orthology (KO) [BR:
too00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
too03032
]
C7K38_10375
03400 DNA repair and recombination proteins [BR:
too03400
]
C7K38_10375
Enzymes [BR:
too01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C7K38_10375
DNA replication proteins [BR:
too03032
]
Prokaryotic type
DNA Topoisomerases
C7K38_10375
DNA repair and recombination proteins [BR:
too03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C7K38_10375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
DUF2996
Toprim_4
T_hemolysin
PI_PP_I
HypA
Motif
Other DBs
NCBI-ProteinID:
AYW48747
LinkDB
All DBs
Position
complement(2158231..2160309)
Genome browser
AA seq
692 aa
AA seq
DB search
MAYKYLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDLPKSKMGIDVENNYEPYYITIRG
KGDVIKDLKKHAKKAEKVYLASDPDREGEAIAWHLAYILGLDPHDKNRVVFNEITKDAVK
EAFKEPRSINLDLVNAQQARRVLDRLVGYSISPILWRKVKKGLSAGRVQSVALKMIIDRE
KEIQNFTPEEYWSIDGNFKKGRKKFKANFWGVDGKKKKLPNEETVKEVTARLTKKDYDVT
KVEQKERKRNPAAPFTTSSMQQEAARKLNFRTGKTMMVAQQLYEGISLGKGGTTGLITYM
RTDSKRIADSAKQEVTDFIEETYGKNYAAHSNKKIKNAQSAQDAHEAIRPTSALRTPEAI
EKYLDKDQLKLYRLIWSRFVASQMKPAILDTVKATLEQNGVIFVANGSKVKFKGFMEVYV
EGRDDGKKDKENVLPELASGDVVQSEDITPNQHFTQPPARFNEATLIRTLEENGVGRPST
YAPTLQTIQKRYYVKLEQKRFEPTELGEIVNNLIEDFFPEIVDVSFTAGMEEDLDHIEEG
KEEWVKLIDRFYLPFEKELETAEEKMEKIQIKDEPAGFDCDVCGHPMVIKLGRYGKFYAC
SNFPECRNTKPIVKEIGVTCPKCEKGQVIERKSKKNRIFYGCDRYPDCDFISNNKPIGRD
CPKCDHYLVEKKKKGGKQVVCSNCDYQEDIQK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcttataaatatttggtgattgtggaatcaccagctaaagctaagacgatcgaaaaa
tatctcgggcgcaactacaaggttgtagccagtgttggacacatccgtgacctaccaaaa
agtaaaatgggtatcgatgtggaaaataattacgaaccctattacattacgatccgtggt
aaaggggacgttattaaagacttaaaaaaacatgcaaaaaaagcagaaaaagtttacctt
gctagtgacccggatagagaaggagaagcgatcgcttggcatctagcttatattttagga
ttagacccacacgataaaaatcgtgttgtttttaatgaaattactaaagatgctgttaaa
gaagcatttaaagaaccacgctcaattaaccttgatttagtgaacgcacaacaagcgcgg
cgtgtattggatcgtttagttggttattctattagccctatcctttggcgcaaagtaaaa
aaaggactaagtgctggccgtgtgcaatctgttgcacttaagatgatcatagatcgagaa
aaagaaattcaaaactttactccagaagaatattggagtattgatggcaactttaaaaaa
ggacgtaagaaatttaaagcgaatttctggggcgttgatgggaaaaagaaaaagttaccc
aatgaagaaacggtcaaagaagttactgcccgtctgacaaaaaaagactatgatgtaact
aaagttgagcaaaaagaacgtaaaagaaacccagcagcaccgtttactacaagtagtatg
caacaagaagcagcccgcaaattaaattttcgtacgggaaaaacaatgatggttgcgcaa
caactatatgaaggaatttctttaggaaaaggtggtacgacagggttaattacttatatg
cgtacagattctaaacgtatcgcagatagtgccaaacaagaagttactgattttattgaa
gaaacttatgggaaaaattatgctgctcacagcaataaaaaaataaaaaacgcgcaaagc
gcgcaagatgctcacgaagctatacgacctacaagtgcgttgcgtaccccagaggctatt
gaaaaatatctagataaagatcaattgaaattgtatcgtttaatttggtcacgttttgtc
gctagtcaaatgaagccggcaatcctagatacagtaaaagctactttggaacaaaatggt
gtaattttcgttgctaatggctctaaggttaaatttaaaggttttatggaagtgtatgtt
gaaggacgcgatgatgggaaaaaagataaagaaaatgtcttaccagaattagcttcaggt
gatgttgtacaatcagaagatatcacgcctaaccagcactttacacaacctcctgctcgc
tttaatgaagctactttaatacgtacattagaagaaaatggcgtaggacggccatcgact
tacgcgcctaccttgcaaacgattcagaaacgttactatgttaagctggagcaaaaacgt
tttgaaccaacggaactaggagaaatcgttaataatcttatcgaagatttcttcccagaa
attgtagatgtttcttttactgctggtatggaagaagatttggaccatattgaagaaggt
aaagaagagtgggtaaaacttatcgatcgtttctacctaccttttgaaaaagagctggaa
acagcggaagaaaaaatggaaaaaatccaaatcaaagacgaacctgctggatttgattgt
gacgtttgtggtcaccctatggttattaaattaggtagatacggaaaattttatgcttgt
agtaattttcctgaatgccgcaatactaaaccaattgttaaagagattggcgtaacttgt
cctaaatgtgaaaaagggcaagtcattgaaagaaagtcaaagaaaaaccgtattttttat
ggttgcgaccgttatccagattgtgactttatctctaataataaacccatcggacgtgat
tgtcctaaatgtgatcactatctagtagagaagaagaaaaaaggtggcaaacaagtggtt
tgctcaaattgcgattatcaagaagacatacaaaaataa
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