Thermodesulfobacterium geofontis: TOPB45_0022
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Entry
TOPB45_0022 CDS
T01547
Name
(GenBank) Ribosomal RNA large subunit methyltransferase N
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
top
Thermodesulfobacterium geofontis
Brite
KEGG Orthology (KO) [BR:
top00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
top03009
]
TOPB45_0022
Enzymes [BR:
top01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
TOPB45_0022
Ribosome biogenesis [BR:
top03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TOPB45_0022
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
RlmN_N
Radical_SAM_2
Fer4_12
Gln-synt_C-ter
Motif
Other DBs
NCBI-ProteinID:
AEH22139
UniProt:
F8C1S0
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All DBs
Position
complement(18780..19868)
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AA seq
362 aa
AA seq
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MNKPNLRNYQLEELKNLMEIIGEPSYRGEQIFHWITCKNAITFEEMTDLPKSLRTKLSEN
FSLELPEIVDKEEDIDGTVKFALKLKDNNLIETVIIPEKDHYTLCVSTQVGCPIGCKFCV
TGKIGFKRNLEVYEIISQVVIARRYLKEKEEELPLRNIVFMGMGEPLLNLKNLIKALKIL
AHPKGFNYSRKRLTVSTVGLLKEMEILAKEFSTALAISLHAPTDEIRRELIPIAKKYSVE
ELILACKKFPRIKNSRTTIEYVIIKDVNDSLESAKKLADLLKGYPFKVNLIPFNPHPEIP
FERPSQEVVERFQKYLLSRGILTTVRKSKGLGIDAACGQLGAKILKSLTPHSINKETAVG
TG
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaccaaatttaagaaattatcaattagaagaattaaaaaatttaatggaaatc
attggagaaccttcctatagaggagagcagatttttcattggattacttgtaaaaatgct
ataacttttgaagaaatgacagatcttccaaagagcctaagaacaaaactttctgaaaat
ttttctcttgaacttccagaaatagttgataaagaagaagatatagatggaacagttaaa
tttgctttaaaactaaaagacaataatctaattgaaacagttataattccagaaaaagat
cattatactctttgtgtttcaactcaagtaggatgtcccataggttgtaagttttgtgtt
acagggaaaattggttttaaaagaaatttagaagtttatgaaataatttctcaagtggtt
attgcaagaaggtatttaaaagaaaaagaagaagagcttcctttaagaaatatagttttt
atggggatgggggaaccgcttttaaatttgaaaaatcttataaaagctctaaaaatactt
gctcatcctaagggatttaattattccagaaaaagacttactgtttcaactgtagggctt
ttaaaagaaatggaaattcttgctaaggagttttctactgccctggcaatatctcttcat
gctcctacagatgaaattagaagagaacttatccctatagctaaaaaatattctgttgaa
gagcttattttagcttgtaaaaaattccctcgcattaaaaatagtagaactactatagaa
tacgtaataataaaagatgtaaatgatagtttggagtctgcaaaaaaattagcggatctt
ttaaagggatatccttttaaagtgaatcttattcctttcaatcctcaccctgaaattcct
tttgaaagaccttctcaagaagtggtagaaagatttcaaaaatatcttctttcaagggga
atattaactactgtaagaaaaagtaaaggtcttggtattgatgctgcttgtggacagctg
ggtgcaaaaattttaaaatctttaactccacactccattaataaagaaaccgcagttggg
acaggttag
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