Thermodesulfobacterium geofontis: TOPB45_0111
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Entry
TOPB45_0111 CDS
T01547
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
top
Thermodesulfobacterium geofontis
Brite
KEGG Orthology (KO) [BR:
top00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
top03400
]
TOPB45_0111
DNA repair and recombination proteins [BR:
top03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TOPB45_0111
Archaeal homologous recombinant proteins
TOPB45_0111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
TsaE
GTP_EFTU
NPHP3_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AEH22227
UniProt:
F8C2D7
LinkDB
All DBs
Position
104728..107727
Genome browser
AA seq
999 aa
AA seq
DB search
MKPLYLSIKGFGPYLKAEIKEDDFKFLTENKLFLISGEIGAGKTTIFDAIVYALYGESTI
EGRNPADLISHFIKNKPNIIPEINFKFFLDGKTYQIIRRPSFKGRAENVSLWIENKLFSA
KKEEIKAKIKELIGLDAKQFKKVFLIPQGEYRKILIAKKEERENLLETIFETFLFSNLED
FLKNKIKDLKELYQSLNEREEDLKKIAQVSNFEELKNKIEELERKQKDLENKLKFYILKK
EKIEKEIKEIEHILQLQREIKELSEKFENLKSKEEEICIKKEVLKKLKILKENLIFYENF
EKIKIELKNNHQKKKNLAKNLCQIEKILESLEIEIKEVYQKEKEIEKKKQELQTLKELEK
RFEEKEILHKNLEKVVELFQKKAKELEIIKEKINTLKREVENAFEEKDQLNRATFLLKER
EIITESLKAFEEYEKSISELKTTEKKFKELKAYYENLENLKRDLEIKNSAQYLAKFLKEG
EPCPVCGSIFHPHPIKTGNFIEELKRREKELLEKKEELEKEEKRFFSLQAKIENLEEILQ
NKDKEKLNKDFENIEKELSNLPQKYFQNPTKNFDILSEIEKKIKNLKTQLNYFENLETKR
REELENLKKEEVALRERLNIIEELIKNYSSQEFKSKIDYLEREIKEWENKKGELENNIRL
LREEKIKTQTQLINIKESIKKDLQEYKKIIKKLISLKREGFLSSINDFKTQASTLSKIEE
IEEEISDFFNELERIKERLKEVKNNLEIYKKKWEPLTQKTLEEEKLYSELELKKNEKRLL
EEALGNLNKDIGRVEKDILHFQEILIAYEKLIKDKKSLEDEYPFLEALYNIIAGKNKKGV
SFHSFVLSLFAQLILKRANFYFKEFSFGRYKFIEDEVLQKKFILEVFDHYTGSKRETKTL
SGGESFLATLSLALGTSDVILYLYRTRPFESLFIDEGFGSLDENTLEKVVNTLLNLAHHS
GRIIGIISHLKELKDKFPVVLEVYKNQFSGSYIKINKNF
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccctttatctttccataaaaggctttggaccctatctcaaagctgaaataaaa
gaagatgattttaaatttctaacagaaaataaacttttcttaatctctggagaaattggg
gcgggtaaaacaactatttttgatgcaattgtctatgccctctacggagaaagcactata
gaaggacgtaacccagctgatcttatttcccattttattaaaaataaacctaatataatt
cctgaaattaattttaaattttttttagatggtaaaacttatcaaatcataagacgtcct
tcctttaaaggaagggctgaaaatgtttctttatggattgaaaataaacttttttcagca
aaaaaagaggaaataaaagcaaaaataaaggaacttataggacttgatgccaaacagttc
aaaaaagtctttcttatccctcaaggagaatatagaaaaatactaattgctaagaaggaa
gaaagagagaaccttcttgagactatctttgaaacttttcttttttctaatttagaagat
tttttaaaaaataaaataaaagatttaaaagaactttatcagtcattaaatgaaagagaa
gaagatttaaaaaaaattgctcaagtatctaattttgaagaactaaaaaataaaatcgaa
gaacttgaaagaaaacaaaaggatttagaaaacaaattaaaattttatatccttaaaaaa
gaaaaaattgaaaaagaaataaaagaaatagaacatattttgcaacttcaaagagaaatt
aaagaactctcggaaaaatttgaaaatcttaaaagtaaagaagaggaaatttgtatcaaa
aaggaagttttaaaaaaattaaaaatattaaaagaaaacctaattttttacgaaaatttt
gaaaaaattaaaattgagttaaaaaataatcatcaaaaaaagaaaaatttagcaaaaaat
ctttgccagattgaaaaaatacttgaatcacttgagattgaaattaaagaggtttatcaa
aaggaaaaggaaatagaaaaaaagaaacaggaacttcaaactttaaaagagttagaaaaa
cgttttgaagaaaaagaaatattacacaaaaatttggaaaaagtagttgagctttttcaa
aaaaaggcaaaagaattagagattatcaaagaaaaaataaatactttaaaaagggaagta
gaaaatgcttttgaagaaaaagaccaattaaatagagctacttttttattaaaagaaaga
gagataatcaccgaatcactcaaagcctttgaagaatatgaaaaatcaatatcagaatta
aaaacaactgaaaaaaaatttaaagaattgaaagcttattacgaaaatcttgagaattta
aaaagagatttagaaataaaaaatagtgcccaatatttagcaaagtttttaaaagaagga
gaaccctgccctgtttgtggctcaatttttcatccccatccaattaaaaccggaaatttt
atagaagaattaaaaagaagagaaaaagaacttttagaaaaaaaagaagaattagaaaag
gaagaaaagaggttttttagcttacaagctaaaatagaaaatcttgaagaaattttacag
aacaaggataaggaaaaacttaacaaagattttgaaaatatagaaaaggaactttctaat
ctgccccaaaaatattttcaaaatcctacaaaaaattttgatatactttcagaaatagaa
aaaaaaatcaaaaatctaaaaactcaattaaattattttgaaaatttggaaacaaaaaga
agagaggaattagaaaacttaaaaaaagaggaagtagcattaagagaacgtttaaatatt
attgaagaacttatcaaaaattattcttctcaagaatttaagtcaaaaatagattattta
gaaagggaaattaaagaatgggaaaataaaaagggggaattggaaaataatattcgtctt
ttaagagaagaaaaaataaaaactcaaacccaattaataaatataaaagaatcaataaaa
aaagatcttcaggaatacaaaaagattattaaaaaattgattagtctaaaaagagagggc
tttctaagttctataaatgatttcaaaactcaagcttctacattatctaaaatagaagaa
attgaagaggaaatttcagacttttttaatgaattggaaagaattaaagagagacttaaa
gaagttaaaaacaatttagaaatttataaaaaaaaatgggaacccttaactcaaaaaacc
ttagaagaagaaaaattatattcagaattagaattaaaaaagaatgaaaaaagactttta
gaagaggctttaggaaatttaaataaagatataggaagagtagaaaaagatatattacat
tttcaagaaattttaatagcctatgaaaaattaataaaagataaaaaatctttagaagat
gagtatccattcttagaggctttatacaatatcattgctggaaaaaataaaaaaggagtt
tctttccattcttttgttctttccctttttgcccagcttattttaaaaagggctaatttt
tattttaaagaattttcctttggtagatataaatttatagaagatgaagtattacaaaaa
aaatttattttagaagtttttgatcattatacagggagtaaaagggagacaaagactctt
tctggaggtgaatcctttttagctactctttctttagcccttggaacttcagatgtaatt
ttatatttatataggacccgtccttttgaatccctttttattgacgagggttttggaagc
cttgatgaaaatactcttgaaaaagtagttaacaccttattaaatttagctcatcatagt
ggaaggataattggaattatatctcatttaaaggaactaaaagataaatttcctgtagtt
ttagaggtttataaaaatcaattttcaggaagttatataaaaataaataaaaacttttaa
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