KEGG   Thermodesulfobacterium geofontis: TOPB45_0151
Entry
TOPB45_0151       CDS       T01547                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
top  Thermodesulfobacterium geofontis
Brite
KEGG Orthology (KO) [BR:top00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:top02048]
    TOPB45_0151
Enzymes [BR:top01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     TOPB45_0151
Prokaryotic defense system [BR:top02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   TOPB45_0151
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD Helicase_C SLFN-g3_helicase AAA_22
Other DBs
NCBI-ProteinID: AEH22267
UniProt: F8C2H7
LinkDB
Position
139980..143036
AA seq 1018 aa
MPYLTENYLVEKPAINWFQDIGYSYVHGSYLIPDAGERESYRHCILKRRFLNAIQRLNPW
LTNTLAEEVYKRVIELDHPDFIIKGKLFYDLLTNGVKLTFKEGKEERTKIVKLIDFESIE
NNDFLIANQFKVEYQYEREQYKIPDLVVFINGIPIAVFELKSLNAEETAKDAFLDHQRKI
KDIPQLYVYSQIIVASDGYETKYGSPTSDWERFFVWEGMLSDDDVEVEEIADGYYKYIYN
GKEITSLELLIKGLFRKEHILEFINDFVFYEKDGETYKKKIAGYHQFYTVKKAIQRTIDC
VLYGKTPEEKRIGVVWHTQGSGKSLTMLFYAKKALKVKELENPLLIFITDRRELDEQLYK
LFSQFSNAKQAESIKDLQETIRTIEGSIIFTTIQKFGKRKAEEYPFLTERKNIIVIADEA
HRSQYRELAQNLRKAIPNASFMGFTATPIELQDRDTYLVFGEPISVYPMDKALRHKIIVP
IYYEPRLAELHLTNEFIDEEFEELSEGLEPELKEHLKKKYARLEELILNQERLEKIAKDI
VEHFNKRVETLEGKGMIVVISRKVAVELYKAIKKIPNAPSIEVVISGNKQRDPEDYHPFI
RKEKDLEDLLNNFKNPEKDPKIVIVVDMLLTGFDVPCLHTMYFDKPMKNHSLIQAIARVN
RVFKDKPAGLIVDYIGIADDLRKSLSQYTLSAINQVLTNINEVIDVLKEKYDIVSSMFYG
LNYQNWKRLKPEELAQLTVTAYNLLHSEDLKKKFIKNYLALKKAYALASPHLETIKIKDD
IMFFEMIKKMIVKYSSTSRKEISRELEYEISQLISRSISAEEPVDIFSLIKKDKPDISIL
NEELLSKIANLAQKNYAVDLLMKLIKDEIKTRIRINPYRYKSLYERLQKLIEMYNIKLIS
TVDVINELIEIAKEIKKKLNEGKELDLTEEELAFYDMLLKEGVFRNKEEIIYVVKEIKKT
IGTFVKIVDWNKKETLRARIKVAIKEILAKVLEMRVGYEKINKITSEIYEQIEMLHAA
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgccttaccttactgaaaactatcttgttgagaagccagcaattaattggtttcaagac
atcggatactcttatgttcatggctcgtatttaattcctgatgcaggcgaaagagaatct
tatagacactgtattcttaaaaggagatttctaaatgctatccaaaggctaaatccttgg
cttacaaatacattggcagaagaggtttataaacgagttatagagcttgaccacccagat
tttattatcaaaggaaagctattttatgaccttttaacaaacggagtaaagcttaccttt
aaggaaggaaaagaagaaagaactaaaattgttaaactgatagattttgaaagcatagaa
aataacgattttcttattgcaaatcagtttaaagtggaatatcagtatgaaagagagcaa
tataaaatacccgaccttgtagtgtttataaacggcatacctatagcagtttttgagcta
aaaagtttaaatgccgaagaaaccgcaaaggatgcctttttagaccatcagagaaagata
aaagatatccctcaactttatgtttattcgcaaattatcgttgcttcagatggatacgaa
actaaatacggttcacctacgagcgattgggaaaggttctttgtttgggaaggtatgtta
agcgacgatgatgtagaggttgaagagattgcagatggctattataaatacatctataat
ggcaaagaaataacttctcttgaactattgattaaaggattgtttagaaaggagcatatc
cttgaattcattaatgattttgtcttttatgaaaaagacggagaaacatataagaaaaag
atagcaggatatcatcagttctatactgttaagaaagctattcagagaacgattgattgc
gttttatacggtaaaactccagaagaaaaaagaataggtgtagtgtggcatactcaagga
tctggtaaatctttaaccatgcttttttatgctaaaaaagctttaaaggtaaaagaactt
gaaaatccactactaatttttattaccgatagaagggaacttgacgaacaactttataag
cttttctcgcagttttccaatgctaaacaagcagaaagtataaaagatttacaagaaact
attagaactattgagggaagtataatatttactaccattcaaaaatttggtaaaagaaag
gctgaagaatatcccttccttacggaaaggaaaaacattatcgttattgctgatgaagct
catagaagccaatatagggagcttgctcaaaatttaagaaaagccattccaaatgcttca
tttatgggatttaccgcaactcctatagaacttcaagatcgtgatacctaccttgtattt
ggagaaccaataagtgtttatccgatggataaagcactcaggcacaaaataatagtgcct
atctattatgaaccaaggcttgcagaacttcatttaacaaatgagtttatagatgaagag
tttgaagaactctccgaaggtcttgaaccggaattgaaagaacatttaaagaaaaaatat
gcaagacttgaagaattgatcttaaatcaagagcggttagaaaagatagccaaagacatc
gttgagcatttcaataaaagagttgaaacactggaagggaaaggcatgatagttgttatt
tcaagaaaggttgcggttgagctatataaagctattaaaaaaattccaaatgctccatca
atagaagtagtcatatcagggaacaaacaaagggaccctgaggattatcatccgtttatt
agaaaagagaaagatttagaggatttgctaaataattttaaaaatccagaaaaagaccca
aagatagtaatcgtagtagacatgcttttaactggctttgatgtcccttgtcttcatact
atgtattttgataaacctatgaaaaatcatagtcttattcaagccatagccagggtaaat
agagtgtttaaggataaacctgctggtttaatcgttgattatataggaattgctgatgat
ttgagaaaatctttgagccaatataccctttcagctataaatcaagttttaaccaatata
aatgaagtgatagatgttttaaaagaaaaatatgatattgtttcttctatgttttatggt
ttaaattatcaaaactggaaaagattaaagcccgaagaattagctcaattaacagttaca
gcatacaatttattacactcagaagatttgaagaaaaaatttattaaaaactatcttgct
cttaagaaagcttatgctttagcaagccctcatcttgaaacaattaaaataaaagatgat
ataatgttttttgagatgattaaaaagatgatcgtaaagtattcaagcacttcaagaaaa
gaaatatcaagagaattagaatacgaaatttctcaacttatctcgagaagtatatcagca
gaggaaccggttgatattttttcattaattaaaaaagacaaaccagatatatctatttta
aatgaggaactactttctaagatagcaaatttagctcaaaaaaattatgcagttgacctt
ttaatgaagcttattaaagatgaaattaaaacaagaataagaataaatccatatagatat
aaaagcttgtatgaaagattgcaaaagttgatcgaaatgtataatataaaacttataagc
accgttgatgtaataaacgagttaatagaaatagctaaggaaataaagaagaaattaaat
gaaggtaaagaattagatttaacagaagaagagttagctttttatgatatgttattgaaa
gaaggtgtatttagaaacaaagaagaaataatttatgtagtaaaagaaatcaaaaaaaca
attggtacatttgttaaaattgtagattggaataaaaaagaaactttaagagcaagaatt
aaagtagctataaaggagatattagctaaggtattagaaatgagagtaggatacgaaaag
ataaataaaatcacttctgaaatttatgaacaaatagaaatgttacatgctgcataa

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