| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta
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| KO |
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| Organism |
top Thermodesulfobacterium geofontis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:top00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TOPB45_0164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:top03021]
TOPB45_0164
03400 DNA repair and recombination proteins [BR:top03400]
TOPB45_0164
Enzymes [BR:top01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TOPB45_0164
Transcription machinery [BR:top03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TOPB45_0164
DNA repair and recombination proteins [BR:top03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TOPB45_0164
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(154890..158978)
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| AA seq |
1362 aa
MSHNTNQRPKIRKSFVKVQQIQDLPDLLKIPKESYQKFLQANTPPDRRQDVGIHRCFSTV
FPIKDYSDIAVLEYLDYKILPPEYTPDEAKEKGLTYEAPMKLRVRLVTYDLDPETGVKSI
KDIKEQEIYFGTIPLMTEDGRFIINGTERAVVNQLQRSPGVIFEKDKTHAKAGRLTYIGR
VIPVKGSWLDFIYDYRGRFLVRIDKRKNIPATVFLKAMGLSEEEILSLFYPTEKYRILEE
GVEKELNYELLAGQKAPIDIVHPETGEVLVKKGKVISAGIIKRLKQSGINVLKLPDEMLI
GKFCAKEIVDKETGEVLLEVNEEITEEKLKLLREKNIKEVEVLFVDAYRYSSALRDALKT
DKVKSKEEALIEIFRKMKPASPVTPEIAEAYFRSLFFDPSTYDLSEIGRYKINLRLNLDL
PITQRTLTLEDVIAILKELIRMKENEEEGDDIDSLANRRVRSVGELVENQFLIGLMRMER
IIKEKLQLQEIETLTPAELINSKPVMAAVKEFFAQGQLSQFMDQTNVLSMITHKRRLSAL
GPGGLTRERAGFEVRDVHPSHYGRICPIETPEGPNIGLIVSPTTYAQVNPYGFLETPYRL
VRNGKVTKQVIYLNAAEEKNLIIAQSTIRIDKEGNILDEYVPARKNGEFIIAHRDEVDLV
DLFPAQIVSVSTSLIPFLEHDDANRALMGSNMQRQAVPLLIPKAPLIGSGMEKSIALNSG
FLLVAEKDGVVEDVDSTRIVVRYDKEDGLLPEIKIYELIKWRKSNQNTTFNQRPIVKPGQ
RIKKGDILADGPSMDHGELALGKDVLVAFMPWKGYNFEDSIIISERLVRDDVFTSIHIEE
FECIARETKLGREEITRDLPNVGEELISNLDESGIIKIGSFVKPGDILVGKVTPKGETTL
TPEEKLLRAIFGEKAKDVKDTSLRVPAGIEGIVIDTKVLTRKGLEKDIRAKQKEDEAIAK
LLRNQADILEILKRGLVTKLSQILEGEKAVKDLEKEGDIYIRKKEPFSFKLLDSIPAPIL
SKLKDVVPPSKKEIVSELLEVYEKRRKEIIEEYEAKINKIKKGDELPPGVLKIVKVYVAM
KRKLQPGDKMAGRHGNKGVISKVVPIEDMPYLPDGTPVDMILSPLGVPSRMNIGQLLETH
LGWACKELGKKLAKLAQDYQVESVKSLLKEIFSEEEYERLVEGKSDEEIIELAKGFIDGI
PVATPVFAGAKEEEIKKWLKLAGLDPSGTTILYDGMTGEPFKEPVTVGYMHMLKLHHLVD
DKIHARSTGPYSLITQQPLGGKSQFGGQRLGEMEVWAIEAYGAAYTLHEFLTVKSDDVEG
RAKMYEKLVRGKNFLEGGMPESFRVLTKELQGLCLDIELIEE |
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| NT seq |
4089 nt +upstreamnt +downstreamnt
atgtcccataatactaatcagagacccaaaataagaaaaagttttgtaaaggtccaacaa
attcaggatttaccagatcttttaaaaattcctaaggaatcttatcagaaatttttacaa
gcaaatacccctccagatagaagacaggatgtaggaattcatagatgtttttctacagtt
tttcctataaaagattattcagacatagctgttttggaatatttagattataaaatctta
cctccagaatatacgccagatgaagctaaggagaaaggattaacttatgaagctccaatg
aaattaagagtacgtttagtaacttatgatcttgatccagaaactggagtgaaaagtata
aaggatataaaagaacaggaaatctattttggtacaattcctcttatgacagaagatgga
agatttattataaatggtaccgaaagagctgtagttaatcaacttcaaaggtctcccgga
gtaatttttgaaaaggataaaacccatgctaaggctggtagattaacttatattggaaga
gtaattcctgtaaaaggttcttggttagattttatatatgattatagagggagatttttg
gtaagaattgataaaaggaaaaatattcctgcaacggtatttttaaaagctatgggatta
tcggaagaggagatcctttctttattttacccaacagaaaaatatagaattttagaagaa
ggggtagaaaaggagttaaattatgaacttttagctgggcaaaaagctcctatagatatt
gttcatccagaaacaggggaagttttagtaaaaaaaggaaaagtaataagtgctggaata
attaaaagattgaagcagtcaggaataaatgttttgaaactccctgatgaaatgctaatt
ggtaaattttgtgccaaagaaattgtagataaagagacaggagaagtattacttgaggta
aatgaagaaattactgaagaaaaacttaaattactaagagaaaaaaacataaaagaagta
gaagttctttttgtagatgcctaccgttattcttcagctttaagagatgctcttaaaact
gataaggtaaaaagtaaagaagaagctttaatagaaatttttagaaaaatgaaacccgca
agtcctgtaactccagaaatagcagaagcctattttagatctctattttttgatccgtca
acttatgatctctctgaaattggaagatataaaataaacttgagactgaatttagatctt
cctattactcaaagaaccctaaccttagaagatgtgattgcaattttgaaagagctaatc
cgcatgaaagagaatgaggaagaaggagatgatatagatagtttagctaataggagggtt
agatctgtaggtgaattagtggaaaatcagtttttaattggtttaatgagaatggaaaga
attattaaagagaagcttcaactccaagagatagaaactttaacccctgcagaacttata
aatagcaaacctgttatggcagcagtaaaagaattttttgctcaagggcagttatctcaa
tttatggatcaaactaatgtactttctatgattactcataaaaggagactttctgcactt
ggaccaggtggtttaacaagagaaagagccggttttgaagttagagatgttcaccccagt
cattatgggagaatctgtcctattgagactccagaaggtccaaatattggattaattgtt
tctccaactacttatgctcaggtaaatccttatggttttttagaaactccttatagatta
gtaagaaacggaaaggttacaaaacaggttatatatttgaatgctgctgaagaaaaaaac
cttataattgctcaatcaactattagaattgataaagaagggaatattttagatgaatat
gttccagcaaggaaaaacggagaatttattattgctcatagagatgaagttgatttagtt
gatttatttcctgctcaaatagtaagtgtttcaacttcgcttattccgtttttagaacat
gatgatgcaaatagagcacttatgggttctaacatgcaaagacaggctgtaccattgctt
attcccaaagcgcctcttattggttctggaatggaaaaatcaattgctttaaattctgga
ttccttttagtggctgaaaaagatggagttgtagaagatgtggatagtacaagaattgta
gtaagatatgataaagaggatggcctcttaccagaaataaaaatttacgaacttattaaa
tggagaaaatcaaatcaaaatactactttcaatcaaagacctattgtaaaaccaggacaa
aggataaaaaaaggggatatcttagcagatggaccatctatggatcacggagagcttgct
ttaggtaaagatgtacttgtagcttttatgccttggaaaggatataattttgaggattct
attattatttcagaaagattggtaagagatgatgtattcacttctatacatattgaagaa
tttgaatgtatagcaagggaaaccaaattaggtagagaagaaataacaagagatcttccc
aatgtaggagaagaacttatatctaatttagatgaaagtggcattataaaaattggaagt
tttgtaaaaccgggagatattcttgtaggaaaagtaacacctaaaggggaaactactctt
actcctgaagaaaaacttttaagagctatttttggagaaaaagcaaaggatgtaaaagat
acttctttaagagttcccgctggaattgagggaattgtaatagatactaaagttttaacc
agaaagggtttagaaaaggatataagagctaaacaaaaagaagacgaagcaatagctaaa
ttattgagaaatcaagcagatattttagagattttaaaaagaggtctggttacaaaactt
tctcagattttagagggtgagaaggcggtaaaagatttagaaaaggaaggagatatttac
attagaaagaaagaacccttttcttttaaactccttgattcaattccagcacctatactt
tcaaaattaaaagatgttgttcctccatctaaaaaagaaatagtttctgaattattagaa
gtgtatgaaaaaagaagaaaagaaatcattgaggagtatgaggctaaaataaacaaaatt
aaaaagggagatgaacttcctcctggtgttctaaaaattgtaaaagtatatgtagctatg
aaaagaaagcttcagccaggagataaaatggcaggaagacatgggaataaaggtgttatt
tctaaggttgttcctatagaggatatgccttatcttccagatggaactcctgtagatatg
atactttctcctttaggagtcccttctcgtatgaatataggacaacttttagaaacccat
ttgggatgggcttgtaaagaacttgggaagaaacttgcaaagcttgcacaagattatcaa
gtagaaagtgtaaaaagtcttttaaaagaaatttttagtgaagaggaatatgaaagatta
gttgagggtaaaagtgatgaagagataatagagttagctaaaggatttatagatggtatt
cctgttgcaactcctgtttttgcaggtgctaaagaagaggaaattaaaaaatggttaaag
cttgctggtttagatccaagtggaacgactatactttatgatggtatgacaggagagcct
tttaaagagcctgtcacagtagggtatatgcatatgctcaaacttcaccacttagtagat
gataaaattcatgcccgttccactggtccttattctttgattactcaacagcctcttggt
ggaaagtctcaatttggtggtcaaagattaggagaaatggaagtttgggcaatagaagct
tatggagcagcttatactcttcatgaatttcttactgtcaaaagtgatgatgtagaaggt
agagcaaaaatgtatgaaaaattggttagagggaaaaactttttagagggaggtatgcct
gaaagttttagagttttaactaaggaattacaagggctttgccttgatattgaattaata
gaagaataa |
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