Thermodesulfobacterium geofontis: TOPB45_0389
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Entry
TOPB45_0389 CDS
T01547
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
top
Thermodesulfobacterium geofontis
Brite
KEGG Orthology (KO) [BR:
top00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
top02000
]
TOPB45_0389
Transporters [BR:
top02000
]
Other transporters
Pores ion channels [TC:
1
]
TOPB45_0389
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AEH22495
UniProt:
F8C475
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Position
complement(379373..381232)
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AA seq
619 aa
AA seq
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MSKKVFHKLSFLFLLGTLVSPSFGAEESKEVKEIPEVVVSADRIEEPLKEVTSQVTVITK
EELEKKNFIFLTDVLRTLPQLYIRANGGPGQTAGAILPRGVKSAHTLVLIDGFKINDPSS
GQVDLGSLTVDDIERIEIIEGPQSTLYGSEAVAGVINIITKKGKGRPKIGLYLEGGSYGT
YKPSFELSGELKNIDFRLNTFYYYTDGFSAYRYGKEKDGFKNSFASAKIGLNLLPKVRFE
FLGRYNYGRIEYDGWDEDAENLRKDYNYLVGAKLNLDLFEQFKQTFSIYKNYSQRKYYEP
ISWSPYTRYTPSTEGFSWENFLNLGKTYSLVFGLDFKREEVEMLSESSWGSSSYDKKREY
TGIFLNNKLYLLENELLLTAGLRYDNYKNLGEKTTYRLGISYIIPKIDVKLKANYGTSFR
VPTFDDLYYPIFSNPNLKPEESKGWDLGFEKTFLENKLILGGSVFYQRYKDLIQFDLQTW
QPQNIGKAVIKGAEVYLTLKLTQNLSLKANYTYLDSEDRDKEKYLIYKPSHKAEATLEYS
LKNLSVIADYVYTGERFANPLNTQKLKSYSLFNLSTNYSFNPKIKFYLKVENLFNANYEE
VKDYGTPDRSFYAGIKFNY
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaggtcttccacaaactcagctttctttttttattaggaactttggtttct
ccttcttttggtgcagaagaaagtaaagaggttaaagaaattcctgaagtagtagtttca
gcagacagaattgaagagcccttaaaagaggtaacttcacaagtaaccgttataaccaaa
gaggagcttgaaaagaaaaattttatctttctcactgatgttttacgaacccttcctcaa
ctatacattagagcaaacggcggtcctggtcagacagcaggagctattcttccaagagga
gttaaatcagctcacaccttagttttgatagatggatttaaaatcaacgatccttcttct
ggacaagttgaccttggaagtttaacggttgatgacatagaaaggattgaaatcattgaa
ggacctcaaagcacactttatgggtctgaggctgtagccggggtaataaatattattact
aaaaagggtaaaggaagaccaaaaatcggtctttaccttgaaggtggttcttacggaacc
tataaaccctcttttgaactatcaggagaacttaaaaatattgactttaggttaaatacc
ttttattactatacagatggcttttctgcctatcgttatggaaaggaaaaagacgggttt
aagaattcctttgcttctgctaagatagggcttaatcttttacctaaggtaagatttgaa
tttttgggaagatataactacggaaggatagagtatgacggctgggatgaagatgcagaa
aaccttagaaaagactataattaccttgttggtgccaaacttaacttagacctttttgaa
caatttaagcaaactttctctatctataagaattactcccaaagaaaatattatgaacct
attagttggtctccttatacccgatatacaccttctacagagggtttttcttgggaaaat
tttttaaacttagggaagacttattctttggtttttggtttagactttaaaagagaggaa
gtagaaatgctctctgaaagtagctggggatcttcaagctatgataaaaaaagggaatat
actgggatttttcttaacaacaagctttaccttttagaaaatgaacttcttttaactgca
gggttaagatatgataattataaaaatcttggagaaaaaactacttacagattaggaatt
agctatataattcctaagattgatgtaaagcttaaagctaactatgggacaagttttaga
gttcctacttttgatgacctttattatcccatctttagcaatcctaaccttaaacctgaa
gaatcaaaagggtgggatcttggatttgaaaagacttttttagaaaataagctaatttta
ggtggttctgttttttaccaaagatataaagatcttatccagtttgaccttcaaacctgg
caaccccaaaacatcggaaaagctgttataaaaggggctgaagtctatcttaccctaaaa
cttactcaaaacttaagcctaaaagctaattatacctatttagattcagaagacagggat
aaagaaaaatatcttatttataagccttctcataaagctgaagctaccttagagtactct
ctcaaaaacctttctgttattgctgattatgtttatactggagaaagatttgcaaatcct
ttaaatactcagaagttaaaatcctactctctttttaatctatctactaattattctttc
aatcccaaaattaagttttatctcaaggtagaaaatctttttaacgctaattatgaagaa
gtaaaagactatggaacccctgatagatctttttatgctggcataaaatttaattactaa
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