Thermodesulfobacterium geofontis: TOPB45_0490
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Entry
TOPB45_0490 CDS
T01547
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
top
Thermodesulfobacterium geofontis
Brite
KEGG Orthology (KO) [BR:
top00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
top03400
]
TOPB45_0490
DNA repair and recombination proteins [BR:
top03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TOPB45_0490
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_22
Lon_C
AAA
AAA_16
nSTAND3
ATPase_2
Rad51
AAA_14
NTPase_1
TniB
KTI12
AAA_5
NACHT
NPHP3_N
AAA_24
ABC_tran
AAA_19
T2SSE
CbiA
ArsA_ATPase
AAA_30
AAA_18
MCM
Elong_Iki1
SLFN-g3_helicase
Bac_DnaA
AAA_29
RsgA_GTPase
RecA
DAP3
DZR
DUF815
DUF7125
DUF7129
zf-C3HC4_2
MqsA_antitoxin
Motif
Other DBs
NCBI-ProteinID:
AEH22592
UniProt:
F8C491
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Position
493928..495241
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AA seq
437 aa
AA seq
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MAYYCQECGYKSLKWFGRCPECGAWNTLVEEKESKDKKKATFEKAKVQKLSEIIFKPQKR
LKTGLTEFDQVLGGGIVSSSLILIGGDPGIGKSTLLTQIAGLLSEKKVKVVYVSAEESLE
QISLRVERLKINRDFYFISDTNLTSILETVEEIKPQLLIIDSIQTVYLPELESSPGGVSQ
VRECANVLMRLAKEKGIIVILVGHITKGGIIAGPKILEHLVDVVLYLEGEKETGFRILRA
VKNRFGPVNEIGVFLMTEEGLIPHSQYEDFFLSEEGSYFCVIEGTRPILVTAQALVTKSY
FAVPRRTAVGFDPIRLSLLVAILEKKLGFNFRDQDIYVKIAGGLKVRDPSADLAIAMALI
SSLLEKPLPTKTVFIGEIGLSAELRTVRDITLRLKEAEKKGFKKAFIPESANIKEKEFKI
EILPCKRVSEVCKYVFS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcttattattgtcaagaatgtggctataaaagtttaaaatggtttgggagatgtcct
gagtgtggggcatggaatactcttgttgaagaaaaagaaagtaaggataagaaaaaagcc
acttttgaaaaggcaaaagttcaaaaactttctgaaattatttttaaaccgcagaaaaga
ttaaaaacgggtttaacagaatttgatcaagtgttaggaggagggattgtttcttcatct
ttaattcttataggaggagatcctggtattggtaaatctactttattaactcaaatagca
ggattactttctgaaaaaaaagtaaaagtagtttatgtttcggcagaggaatctcttgag
caaataagtttaagagttgaaagattaaaaataaatagggatttttattttatttctgat
accaatttaacttcaattttagagacagtagaagagataaagccacagcttttaattata
gattctatacagactgtttatcttccagagcttgaaagttctcctgggggagtttctcaa
gtaagagaatgtgctaatgtacttatgcgtttagcaaaggaaaagggtattattgtaatt
ttagtagggcatattacaaaaggtggtattatagcaggccccaaaattttagaacatctt
gtagatgtggttctatatttagaaggagaaaaagaaacaggttttagaattttaagagct
gttaagaatcgctttggtcctgtaaatgagataggagtttttttaatgactgaagaagga
cttatcccccattctcaatatgaagactttttcttatcagaagaaggaagctatttttgt
gtgatagaaggaacaagacctattttagttactgctcaggccttagtaactaagagttat
tttgctgttccaagaagaacagctgttggatttgatcctattagactttctcttttagtt
gctattttagaaaaaaaacttggttttaactttagagatcaggatatttatgtaaaaata
gcaggtggtttaaaagtaagagatccttctgcagatttagcaattgcaatggcattaatt
tcaagtttacttgaaaaaccactaccaactaaaacagtttttataggagaaatagggctt
tcagcagaattaagaactgtaagagatataactttaaggctaaaagaggctgagaaaaag
ggttttaaaaaagcctttattccagagtcagcaaatattaaagaaaaggaatttaaaata
gagattttaccttgtaaaagggtatctgaagtatgtaaatatgtttttagttaa
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