Entry |
|
Name |
(GenBank) DNA polymerase I
|
KO |
|
Organism |
top Thermodesulfobacterium geofontis
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:top00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TOPB45_0793
03410 Base excision repair
TOPB45_0793
03420 Nucleotide excision repair
TOPB45_0793
03440 Homologous recombination
TOPB45_0793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:top03032]
TOPB45_0793
03400 DNA repair and recombination proteins [BR:top03400]
TOPB45_0793
Enzymes [BR:top01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TOPB45_0793
DNA replication proteins [BR:top03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TOPB45_0793
DNA repair and recombination proteins [BR:top03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TOPB45_0793
NER (nucleotide excision repair)
GGR (global genome repair) factors
TOPB45_0793
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(774677..777277)
|
AA seq |
866 aa
MVSSYLKKIPKDTVILIDGSSFIYRAYFAIPGYLATTKGFPTKAIFGVTQMVLKILKEWD
PEYIIWFMDEKEPTFRHEIYENYKATRPKMPDDLKIQIPYIRNIIHSLGIPVLSHPGYEG
DDLIASFIKNIIKKQNLSAIIVAGDKDLYSLIDKNIAIYDPVREKFLDLDAFLEKYQFPP
QVFPEFRALTGDPSDNIPGVPGIGEKTAKELLIKFKNLENLYQNIKQVSLSKLRESLLKY
KDQVLNNLSLLTLNYNAPLPSLDIIYYKRKEPDYSTLRKIFKELEFRKLLSEIKYTPPEF
KPLLIENKDLSQIPERDYLSLFPLQYQGYIFNLAHAPEIAVAFSEKEAYKLSTSCLKDLI
SKFTKTKFILHDYKNFLKLFGFSLNKVFDTKLASYLLNPSLKKYELEFLLQEYLDISLGS
SKISEDEEIAIKTCSLFLLGKELINRIEEEGLSEWLEKVEIPLSEVLFEMEKKGFKIDLE
YVRTLNQEYQKTLKELEDKLFEIAGCRFNPKSSQEVSNILFKKLNLPSIKKTPKSSLPST
DAEVLEELAPLHPFVRLLIQYRTLYKIKSTYLEAFLKYAETKTHRLHTEFNQTGTATGRL
SSQNPNLQNIPIKGEEGLSIRRAFIAEDGCMLCSLDYSQIELRILAHFSEDKNLISAFEK
GEDIHTFTACEVFGVTPEKVTPEMRRMSKAINFGIAYGMSAYGLAKELKISPKEAEIIIN
RYFSRYPGIKEYIQKTIEFAKENGYVKTLVGRKRYIPELFSPNKSIKELGQRMAINTPIQ
GSAADLIKCAMVALQKELKRHNLKTAIILQVHDELVLEVPEEEIEIIKELAPKIMENPFK
YLNLPYKLNVPIKVNFSFGKNWAECK |
NT seq |
2601 nt +upstreamnt +downstreamnt
atggttagttcttatttaaaaaaaatacctaaagatacagtaattttaatagatggttct
tcttttatttatagagcttattttgccatacctggttatttagccacaactaaaggcttc
ccaactaaagcaatttttggtgtaacccaaatggttcttaaaatcttaaaggaatgggat
ccagaatacattatttggtttatggatgaaaaggagccaactttcagacacgaaatctat
gaaaattataaagctactcgtcccaaaatgccagatgaccttaaaatacaaattccctat
ataagaaatataatccactctctgggaatacccgttctctcacatcctggatatgaggga
gatgaccttatagcgagctttataaagaacataataaaaaaacagaatctttctgctatt
attgtggcaggagacaaggatctttattctttaattgataaaaatatagctatttatgat
cctgttagagaaaaattcttagatcttgatgcttttcttgaaaaataccaatttcctccc
caagtttttcctgaatttagagccttaactggggatcccagtgataatattcctggtgtt
cccggaataggagaaaaaacagctaaagaattattaataaaatttaaaaatttagaaaat
ctatatcaaaatatcaaacaagtttctttatctaaattaagagaaagtcttcttaaatat
aaagatcaggtattaaataatttaagccttttaactttaaattataatgcaccacttcct
tctttagatattatctattataaaagaaaggaacctgattattctactttaagaaaaatt
tttaaagaattagaatttagaaaactcctatcagagataaaatacactcctcctgaattt
aaacctctcttaatagaaaacaaggatctttctcaaattccagaaagggattatttaagc
ctttttcccttacaataccagggttatatattcaatttagctcatgcccctgagatagca
gtagccttttctgaaaaggaagcttataaattatcaacttcctgtttaaaagatttaatc
tcaaaatttactaaaaccaaattcatcttgcatgattataaaaattttcttaaacttttc
ggtttttctctgaataaagtatttgatactaaattagcaagttatcttttaaatccttct
ctaaaaaaatatgagcttgaatttttattgcaagaatatttagatattagcttaggttcc
tcaaaaatttctgaagatgaagaaattgctataaaaacttgtagtctttttctattagga
aaggaattaattaatcgtattgaagaagaaggtcttagtgaatggcttgaaaaggttgaa
atacctttaagcgaagtactttttgaaatggaaaagaagggattcaaaatagatttagaa
tacgtaagaacacttaatcaggaatatcaaaaaactcttaaagaattggaagataaatta
tttgaaatagcaggttgtagatttaatcccaaatcaagtcaagaagtaagtaatattctt
tttaaaaaattaaatttaccttccattaaaaagacacctaaaagttccctcccttcaacc
gatgcggaagttttagaagaacttgctcctcttcatccttttgttaggttacttatacaa
tatagaacactttacaaaataaaaagtacttatttagaagcatttttaaaatatgcggag
actaaaacacacagattacataccgaatttaatcaaacaggaacagctacaggaaggcta
agttcccaaaatccaaatttacaaaatatacctataaaaggagaagaggggctttctata
agaagggcttttattgctgaagatggctgtatgctttgtagcttagattactctcaaatt
gaattaagaatccttgctcatttttctgaagataaaaatcttatttctgcctttgaaaag
ggagaagatattcatacttttacagcttgtgaagtgtttggtgtaactccagaaaaggtt
acccctgaaatgagaagaatgagtaaagctataaattttggaatagcttatggaatgagt
gcttatggattagctaaagaattaaaaataagccctaaggaagcagaaattataataaat
cgttattttagtcgttatcctggaatcaaagaatacattcaaaaaactatagaatttgct
aaagagaatggttatgtaaaaaccttagttggaaggaagcgctatatacctgaacttttt
agcccaaataaaagtataaaggagttaggacaaagaatggcaattaataccccaattcaa
ggttctgctgcagaccttataaaatgcgcaatggtagctttgcaaaaagagttaaaaagg
cataatcttaaaactgcaataattttacaagtccatgatgaattggtacttgaagttcct
gaagaagaaatagaaataataaaagagcttgctcctaaaataatggaaaatccttttaaa
tatttaaaccttccttataagcttaatgttcccataaaagttaatttttcctttggcaaa
aattgggcagaatgtaaatag |