KEGG   Thermodesulfobacterium geofontis: TOPB45_0793
Entry
TOPB45_0793       CDS       T01547                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
top  Thermodesulfobacterium geofontis
Pathway
top03030  DNA replication
top03410  Base excision repair
top03420  Nucleotide excision repair
top03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:top00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TOPB45_0793
   03410 Base excision repair
    TOPB45_0793
   03420 Nucleotide excision repair
    TOPB45_0793
   03440 Homologous recombination
    TOPB45_0793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:top03032]
    TOPB45_0793
   03400 DNA repair and recombination proteins [BR:top03400]
    TOPB45_0793
Enzymes [BR:top01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TOPB45_0793
DNA replication proteins [BR:top03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     TOPB45_0793
DNA repair and recombination proteins [BR:top03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     TOPB45_0793
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     TOPB45_0793
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_2 DNA_polI_exo1 DUF6240 HHH
Other DBs
NCBI-ProteinID: AEH22894
UniProt: F8C5C2
LinkDB
Position
complement(774677..777277)
AA seq 866 aa
MVSSYLKKIPKDTVILIDGSSFIYRAYFAIPGYLATTKGFPTKAIFGVTQMVLKILKEWD
PEYIIWFMDEKEPTFRHEIYENYKATRPKMPDDLKIQIPYIRNIIHSLGIPVLSHPGYEG
DDLIASFIKNIIKKQNLSAIIVAGDKDLYSLIDKNIAIYDPVREKFLDLDAFLEKYQFPP
QVFPEFRALTGDPSDNIPGVPGIGEKTAKELLIKFKNLENLYQNIKQVSLSKLRESLLKY
KDQVLNNLSLLTLNYNAPLPSLDIIYYKRKEPDYSTLRKIFKELEFRKLLSEIKYTPPEF
KPLLIENKDLSQIPERDYLSLFPLQYQGYIFNLAHAPEIAVAFSEKEAYKLSTSCLKDLI
SKFTKTKFILHDYKNFLKLFGFSLNKVFDTKLASYLLNPSLKKYELEFLLQEYLDISLGS
SKISEDEEIAIKTCSLFLLGKELINRIEEEGLSEWLEKVEIPLSEVLFEMEKKGFKIDLE
YVRTLNQEYQKTLKELEDKLFEIAGCRFNPKSSQEVSNILFKKLNLPSIKKTPKSSLPST
DAEVLEELAPLHPFVRLLIQYRTLYKIKSTYLEAFLKYAETKTHRLHTEFNQTGTATGRL
SSQNPNLQNIPIKGEEGLSIRRAFIAEDGCMLCSLDYSQIELRILAHFSEDKNLISAFEK
GEDIHTFTACEVFGVTPEKVTPEMRRMSKAINFGIAYGMSAYGLAKELKISPKEAEIIIN
RYFSRYPGIKEYIQKTIEFAKENGYVKTLVGRKRYIPELFSPNKSIKELGQRMAINTPIQ
GSAADLIKCAMVALQKELKRHNLKTAIILQVHDELVLEVPEEEIEIIKELAPKIMENPFK
YLNLPYKLNVPIKVNFSFGKNWAECK
NT seq 2601 nt   +upstreamnt  +downstreamnt
atggttagttcttatttaaaaaaaatacctaaagatacagtaattttaatagatggttct
tcttttatttatagagcttattttgccatacctggttatttagccacaactaaaggcttc
ccaactaaagcaatttttggtgtaacccaaatggttcttaaaatcttaaaggaatgggat
ccagaatacattatttggtttatggatgaaaaggagccaactttcagacacgaaatctat
gaaaattataaagctactcgtcccaaaatgccagatgaccttaaaatacaaattccctat
ataagaaatataatccactctctgggaatacccgttctctcacatcctggatatgaggga
gatgaccttatagcgagctttataaagaacataataaaaaaacagaatctttctgctatt
attgtggcaggagacaaggatctttattctttaattgataaaaatatagctatttatgat
cctgttagagaaaaattcttagatcttgatgcttttcttgaaaaataccaatttcctccc
caagtttttcctgaatttagagccttaactggggatcccagtgataatattcctggtgtt
cccggaataggagaaaaaacagctaaagaattattaataaaatttaaaaatttagaaaat
ctatatcaaaatatcaaacaagtttctttatctaaattaagagaaagtcttcttaaatat
aaagatcaggtattaaataatttaagccttttaactttaaattataatgcaccacttcct
tctttagatattatctattataaaagaaaggaacctgattattctactttaagaaaaatt
tttaaagaattagaatttagaaaactcctatcagagataaaatacactcctcctgaattt
aaacctctcttaatagaaaacaaggatctttctcaaattccagaaagggattatttaagc
ctttttcccttacaataccagggttatatattcaatttagctcatgcccctgagatagca
gtagccttttctgaaaaggaagcttataaattatcaacttcctgtttaaaagatttaatc
tcaaaatttactaaaaccaaattcatcttgcatgattataaaaattttcttaaacttttc
ggtttttctctgaataaagtatttgatactaaattagcaagttatcttttaaatccttct
ctaaaaaaatatgagcttgaatttttattgcaagaatatttagatattagcttaggttcc
tcaaaaatttctgaagatgaagaaattgctataaaaacttgtagtctttttctattagga
aaggaattaattaatcgtattgaagaagaaggtcttagtgaatggcttgaaaaggttgaa
atacctttaagcgaagtactttttgaaatggaaaagaagggattcaaaatagatttagaa
tacgtaagaacacttaatcaggaatatcaaaaaactcttaaagaattggaagataaatta
tttgaaatagcaggttgtagatttaatcccaaatcaagtcaagaagtaagtaatattctt
tttaaaaaattaaatttaccttccattaaaaagacacctaaaagttccctcccttcaacc
gatgcggaagttttagaagaacttgctcctcttcatccttttgttaggttacttatacaa
tatagaacactttacaaaataaaaagtacttatttagaagcatttttaaaatatgcggag
actaaaacacacagattacataccgaatttaatcaaacaggaacagctacaggaaggcta
agttcccaaaatccaaatttacaaaatatacctataaaaggagaagaggggctttctata
agaagggcttttattgctgaagatggctgtatgctttgtagcttagattactctcaaatt
gaattaagaatccttgctcatttttctgaagataaaaatcttatttctgcctttgaaaag
ggagaagatattcatacttttacagcttgtgaagtgtttggtgtaactccagaaaaggtt
acccctgaaatgagaagaatgagtaaagctataaattttggaatagcttatggaatgagt
gcttatggattagctaaagaattaaaaataagccctaaggaagcagaaattataataaat
cgttattttagtcgttatcctggaatcaaagaatacattcaaaaaactatagaatttgct
aaagagaatggttatgtaaaaaccttagttggaaggaagcgctatatacctgaacttttt
agcccaaataaaagtataaaggagttaggacaaagaatggcaattaataccccaattcaa
ggttctgctgcagaccttataaaatgcgcaatggtagctttgcaaaaagagttaaaaagg
cataatcttaaaactgcaataattttacaagtccatgatgaattggtacttgaagttcct
gaagaagaaatagaaataataaaagagcttgctcctaaaataatggaaaatccttttaaa
tatttaaaccttccttataagcttaatgttcccataaaagttaatttttcctttggcaaa
aattgggcagaatgtaaatag

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