Thermodesulfobacterium geofontis: TOPB45_0793
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Entry
TOPB45_0793 CDS
T01547
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
top
Thermodesulfobacterium geofontis
Pathway
top03030
DNA replication
top03410
Base excision repair
top03420
Nucleotide excision repair
top03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
top00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TOPB45_0793
03410 Base excision repair
TOPB45_0793
03420 Nucleotide excision repair
TOPB45_0793
03440 Homologous recombination
TOPB45_0793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
top03032
]
TOPB45_0793
03400 DNA repair and recombination proteins [BR:
top03400
]
TOPB45_0793
Enzymes [BR:
top01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TOPB45_0793
DNA replication proteins [BR:
top03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TOPB45_0793
DNA repair and recombination proteins [BR:
top03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TOPB45_0793
NER (nucleotide excision repair)
GGR (global genome repair) factors
TOPB45_0793
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
DNA_polI_exo1
DUF6240
DUF8294
HHH
Motif
Other DBs
NCBI-ProteinID:
AEH22894
UniProt:
F8C5C2
LinkDB
All DBs
Position
complement(774677..777277)
Genome browser
AA seq
866 aa
AA seq
DB search
MVSSYLKKIPKDTVILIDGSSFIYRAYFAIPGYLATTKGFPTKAIFGVTQMVLKILKEWD
PEYIIWFMDEKEPTFRHEIYENYKATRPKMPDDLKIQIPYIRNIIHSLGIPVLSHPGYEG
DDLIASFIKNIIKKQNLSAIIVAGDKDLYSLIDKNIAIYDPVREKFLDLDAFLEKYQFPP
QVFPEFRALTGDPSDNIPGVPGIGEKTAKELLIKFKNLENLYQNIKQVSLSKLRESLLKY
KDQVLNNLSLLTLNYNAPLPSLDIIYYKRKEPDYSTLRKIFKELEFRKLLSEIKYTPPEF
KPLLIENKDLSQIPERDYLSLFPLQYQGYIFNLAHAPEIAVAFSEKEAYKLSTSCLKDLI
SKFTKTKFILHDYKNFLKLFGFSLNKVFDTKLASYLLNPSLKKYELEFLLQEYLDISLGS
SKISEDEEIAIKTCSLFLLGKELINRIEEEGLSEWLEKVEIPLSEVLFEMEKKGFKIDLE
YVRTLNQEYQKTLKELEDKLFEIAGCRFNPKSSQEVSNILFKKLNLPSIKKTPKSSLPST
DAEVLEELAPLHPFVRLLIQYRTLYKIKSTYLEAFLKYAETKTHRLHTEFNQTGTATGRL
SSQNPNLQNIPIKGEEGLSIRRAFIAEDGCMLCSLDYSQIELRILAHFSEDKNLISAFEK
GEDIHTFTACEVFGVTPEKVTPEMRRMSKAINFGIAYGMSAYGLAKELKISPKEAEIIIN
RYFSRYPGIKEYIQKTIEFAKENGYVKTLVGRKRYIPELFSPNKSIKELGQRMAINTPIQ
GSAADLIKCAMVALQKELKRHNLKTAIILQVHDELVLEVPEEEIEIIKELAPKIMENPFK
YLNLPYKLNVPIKVNFSFGKNWAECK
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggttagttcttatttaaaaaaaatacctaaagatacagtaattttaatagatggttct
tcttttatttatagagcttattttgccatacctggttatttagccacaactaaaggcttc
ccaactaaagcaatttttggtgtaacccaaatggttcttaaaatcttaaaggaatgggat
ccagaatacattatttggtttatggatgaaaaggagccaactttcagacacgaaatctat
gaaaattataaagctactcgtcccaaaatgccagatgaccttaaaatacaaattccctat
ataagaaatataatccactctctgggaatacccgttctctcacatcctggatatgaggga
gatgaccttatagcgagctttataaagaacataataaaaaaacagaatctttctgctatt
attgtggcaggagacaaggatctttattctttaattgataaaaatatagctatttatgat
cctgttagagaaaaattcttagatcttgatgcttttcttgaaaaataccaatttcctccc
caagtttttcctgaatttagagccttaactggggatcccagtgataatattcctggtgtt
cccggaataggagaaaaaacagctaaagaattattaataaaatttaaaaatttagaaaat
ctatatcaaaatatcaaacaagtttctttatctaaattaagagaaagtcttcttaaatat
aaagatcaggtattaaataatttaagccttttaactttaaattataatgcaccacttcct
tctttagatattatctattataaaagaaaggaacctgattattctactttaagaaaaatt
tttaaagaattagaatttagaaaactcctatcagagataaaatacactcctcctgaattt
aaacctctcttaatagaaaacaaggatctttctcaaattccagaaagggattatttaagc
ctttttcccttacaataccagggttatatattcaatttagctcatgcccctgagatagca
gtagccttttctgaaaaggaagcttataaattatcaacttcctgtttaaaagatttaatc
tcaaaatttactaaaaccaaattcatcttgcatgattataaaaattttcttaaacttttc
ggtttttctctgaataaagtatttgatactaaattagcaagttatcttttaaatccttct
ctaaaaaaatatgagcttgaatttttattgcaagaatatttagatattagcttaggttcc
tcaaaaatttctgaagatgaagaaattgctataaaaacttgtagtctttttctattagga
aaggaattaattaatcgtattgaagaagaaggtcttagtgaatggcttgaaaaggttgaa
atacctttaagcgaagtactttttgaaatggaaaagaagggattcaaaatagatttagaa
tacgtaagaacacttaatcaggaatatcaaaaaactcttaaagaattggaagataaatta
tttgaaatagcaggttgtagatttaatcccaaatcaagtcaagaagtaagtaatattctt
tttaaaaaattaaatttaccttccattaaaaagacacctaaaagttccctcccttcaacc
gatgcggaagttttagaagaacttgctcctcttcatccttttgttaggttacttatacaa
tatagaacactttacaaaataaaaagtacttatttagaagcatttttaaaatatgcggag
actaaaacacacagattacataccgaatttaatcaaacaggaacagctacaggaaggcta
agttcccaaaatccaaatttacaaaatatacctataaaaggagaagaggggctttctata
agaagggcttttattgctgaagatggctgtatgctttgtagcttagattactctcaaatt
gaattaagaatccttgctcatttttctgaagataaaaatcttatttctgcctttgaaaag
ggagaagatattcatacttttacagcttgtgaagtgtttggtgtaactccagaaaaggtt
acccctgaaatgagaagaatgagtaaagctataaattttggaatagcttatggaatgagt
gcttatggattagctaaagaattaaaaataagccctaaggaagcagaaattataataaat
cgttattttagtcgttatcctggaatcaaagaatacattcaaaaaactatagaatttgct
aaagagaatggttatgtaaaaaccttagttggaaggaagcgctatatacctgaacttttt
agcccaaataaaagtataaaggagttaggacaaagaatggcaattaataccccaattcaa
ggttctgctgcagaccttataaaatgcgcaatggtagctttgcaaaaagagttaaaaagg
cataatcttaaaactgcaataattttacaagtccatgatgaattggtacttgaagttcct
gaagaagaaatagaaataataaaagagcttgctcctaaaataatggaaaatccttttaaa
tatttaaaccttccttataagcttaatgttcccataaaagttaatttttcctttggcaaa
aattgggcagaatgtaaatag
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