Entry |
|
Name |
|
KO |
K07456 | DNA mismatch repair protein MutS2 |
|
Organism |
top Thermodesulfobacterium geofontis
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:top00001]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TOPB45_0795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:top03400]
TOPB45_0795
DNA repair and recombination proteins [BR:top03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TOPB45_0795
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
777615..779906
|
AA seq |
763 aa
MFKSLNKLDWSRILNYLNNFLYSDFSKERCQNLVPLFSYEEAVKAQEKTKFIWDLLEKGK
KLELNPLKSLKSLFERASKREFFLPIELSEIKKWFLTLEKLISYLENSPFSNLKTLYEEI
KEIDLYLDRVLDWEKGEIKDKASYNLFIIRKKLKEAKEILFTKLEKIRENLFKKGYLQEN
LFTQKEGRYVLPVKVEYKNKVKGILHGVSQSGATVFIEPASIMSLSNEIENLRRIEQREV
VKILREVSQEIFSRSQSFFNLEDIYADFEIAFAKASLGKTYKGKFPLLKKEGLIKICSGI
HPLLLLKENSSKVVYNDFIIEKGLLISGPNLGGKTVSLKTIGILILMGQSGFPIPVEAAE
FPLFSKIFVDLGDDQDIIEGESSFSSHLKILKEILDNADENTLVLLDEPGKGTNPEEGIA
LVAAIINEILKRKTKVVVTTHSQFLKTLSLKMKDLKLATMEYDSETKEPTYKIRYNVLGE
SLAFDLAKKLGFSENILSEAIGYLKNKEYWEWYKIIEKERKKLKELEEELNLKLKNLESK
EKELEEKKKELKSLYEKKIEELISIWNEEFQKMIKNIKKESISYKKAIKNFEEFVNKFLK
SSTREEEIKEGDKVLVLPFKREGEVLKVKDKLVEVKLGNFRIEVPKGNIIKDYSEIKPPS
FKYYKPKDLENFQKSHEKIEKKEILKLLGLTVEEALEEIEKTLNKAFLEGIPKVYLVHGH
GTGKLRESVREYLKNHPLVKNFKFADLMEGGTGVTIVYLEEKN |
NT seq |
2292 nt +upstreamnt +downstreamnt
gtgtttaaatctttaaataaattagattggtcaaggatattaaattatttaaataatttt
ctctattcagatttttcaaaagagcgttgtcaaaatttagtaccccttttttcctatgaa
gaagctgttaaagcacaagagaaaactaaatttatctgggatttattagaaaagggtaaa
aaattagagcttaatcctttaaaatctttaaaaagtctatttgaaagggcatcaaaaagg
gaatttttcttacctattgaactttcagaaattaaaaaatggtttctcaccttagaaaaa
cttatttcttatcttgaaaattcccctttttctaatttaaaaactctatatgaggaaatc
aaagaaatagatctttatcttgatagagtacttgattgggaaaaaggagaaataaaggat
aaagcttcttacaatttatttatcataagaaaaaagctaaaagaagcaaaagaaattttg
tttaccaaactggaaaaaataagagaaaatcttttcaaaaaaggttatcttcaggagaat
cttttcacacaaaaagagggcagatatgtattgcctgttaaggtagaatataaaaataag
gtaaagggtatattgcatggggtttcccaaagtggagctacagtatttatagagcctgca
agtataatgtctttaagtaatgaaatagaaaatcttcgtcgtatagagcaaagagaggta
gttaaaattttaagagaagtttctcaggaaatcttttctcgctcccaatcttttttcaat
ttagaagatatttatgcggattttgaaattgcttttgcaaaagcaagtctcggaaaaact
tataaagggaagtttcctcttttaaaaaaggaaggtttaataaaaatttgctcaggtatt
cacccccttcttttattaaaagagaattcttctaaagtagtttataatgattttataatt
gagaagggtcttcttatctctggtcccaatttagggggtaaaaccgtatccttaaaaacc
ataggtattcttatccttatgggacaaagcggttttcctattccagttgaggcagcagaa
tttcctttattttctaaaatctttgtagatttgggagatgatcaagatataatagaaggc
gagtcttctttttcttcacatttaaaaattttaaaagagattttagataatgctgatgaa
aacactctggttttgcttgatgaacctgggaagggcactaatccagaggaaggaatagcc
ttagttgcagctattataaatgaaatccttaagcgaaaaaccaaagttgtggttactacc
cattctcaatttcttaaaactcttagtttaaaaatgaaagatctgaaattagctactatg
gaatatgattcagaaacaaaagaaccaacttataaaataagatataatgttttgggagaa
tctttagcctttgatcttgctaaaaaattggggttttcagaaaatattttaagcgaggca
ataggttatctaaaaaataaagagtattgggaatggtataaaataatagaaaaagaaaga
aaaaaacttaaggagctggaagaggagcttaatttaaaattgaaaaaccttgagtctaaa
gaaaaggagttagaagagaagaaaaaagaattaaaaagcctttatgagaaaaagatagaa
gaattaatctctatttggaatgaagaatttcaaaaaatgataaaaaatataaaaaaggaa
agcattagttataaaaaggcaattaaaaattttgaagaatttgtgaataaatttttaaaa
agttcaacaagagaagaagaaataaaagaaggggataaagtgcttgtgttaccttttaaa
agggaaggggaggttttaaaagtaaaagataaattggtggaggtaaaacttgggaatttt
aggatagaggttcctaaaggaaatataataaaagattattcagaaataaaaccaccttct
tttaaatattacaaacctaaggatttagaaaattttcagaaatctcacgaaaagatcgag
aaaaaagaaattttaaaacttttgggattaaccgttgaggaagcattagaagaaattgaa
aagaccttaaataaagcttttttagaaggaattccgaaagtctatttagttcatggacac
gggacgggtaaactaagagaaagtgttagagaatatcttaaaaatcatcccctggttaaa
aatttcaaatttgctgatttaatggaaggtggaacaggagtcactattgtttatttggaa
gaaaaaaattaa |