Thermodesulfobacterium geofontis: TOPB45_0916
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Entry
TOPB45_0916 CDS
T01547
Name
(GenBank) type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
top
Thermodesulfobacterium geofontis
Brite
KEGG Orthology (KO) [BR:
top00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
top02044
]
TOPB45_0916
02035 Bacterial motility proteins [BR:
top02035
]
TOPB45_0916
Secretion system [BR:
top02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
TOPB45_0916
Bacterial motility proteins [BR:
top02035
]
Pilus system
Pilus assembly proteins
TOPB45_0916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_30
AAA_23
AAA_29
AAA_16
AAA_11
AAA_19
AAA_22
ABC_tran
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEH23013
UniProt:
F8C5N1
LinkDB
All DBs
Position
903316..904956
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AA seq
546 aa
AA seq
DB search
MEKKPIGQLLKEKGFISEDYIQFALLEQKATGEKLGEVLVRTGLATDLEIAMVLAEQSGL
PFLDLSEISPSQEALNKVPPSFARKYEVLPIRINPDRTLEVAISDPFNFYLIEATSRVSG
LKVAPFVSASSQIKKTIEKFYYFLENPVEAQISTVIEKLKINPQADFDAEDLLEKLLILA
IIKRATDLHITPTEKSVQIHLRIDGVLEPLIVFPRAIYGKLVNVVKIKGQMDIAETRLPQ
DGRMQFSFLGESFDLRISSIRTTFGENLVLRFLPLGAYAQHLFYLGFSNEQIELIRQIMG
SPYGMFLVTGPTGSGKTTTLFACLRILNLLEKNVLTAEDPIEYRLPLVRQTQVHEEIGYT
FAKAIRHFLRQDPDVIMVGEIRDEETAQMAVRASLTGHLFLSTVHTNDALSTIFRLRDLG
ISPDMLSSTLIGLLAQRLIRKICPYCKEEYKPDPKLLKYYGLPENYVYYRGRGCESCRFK
GYLGRTVIAEIFYIDEDFIKLLSKDATFPEFLELAKSKNIKFLKDDAKRKVLEGITTVEE
IKRVIG
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaacctataggtcagcttcttaaagaaaagggatttattagcgaagattat
attcaatttgctttacttgagcaaaaagcaacaggagaaaaacttggagaggttttagta
agaacaggtctggcaacagatttagaaattgctatggttcttgctgaacaaagtggtttg
ccttttcttgacctttctgaaatttcaccctctcaagaagctttaaataaagttcctcct
tcttttgcaagaaaatatgaagttttgcctataagaattaatcctgatagaactcttgag
gtggctatttcagatccctttaatttttacctaattgaggcaacttcaagggtttcagga
ttaaaagtagctccttttgtatctgcatcttctcaaattaaaaaaactatagaaaaattc
tattatttcttagaaaatcccgttgaagcacaaatttcaactgttattgaaaaattaaag
attaatcctcaggcggactttgatgctgaagatcttttggaaaaacttttaatcttagcc
attataaaaagagctacagatttacatatcactcccactgaaaagagtgttcaaattcat
ttaagaatagatggagtgcttgagcctttaatagtttttcccagagctatatatggaaag
ttggtaaatgtggtaaaaataaaagggcagatggatatagctgaaacaaggcttcctcag
gatgggagaatgcaattttccttcttaggagaatcttttgatttgagaatttcaagcata
agaacaacctttggagaaaatttagtcttaagatttctccctttaggtgcttatgcacaa
catcttttttatttgggtttttctaatgaacagattgagcttattcgtcaaattatgggt
tctccctatggaatgtttttagttactggaccaactggttctggtaaaacaacaacttta
tttgcctgtcttagaattcttaatctccttgaaaaaaatgttctcactgcagaggatcct
attgaatataggttacctttagtaagacaaacacaggtgcatgaagaaattggttatacc
tttgcaaaagctataaggcattttttgcgtcaagaccctgatgtaattatggtaggtgaa
ataagagatgaagaaacagctcaaatggcagtaagagcatctcttaccgggcatcttttt
ctctctaccgttcataccaatgacgcactttccactatttttagattaagagatcttgga
atttctccagatatgctttcttctactctgataggacttttagcacaaagattaataaga
aaaatctgtccctattgtaaagaagaatataaacctgatcctaaacttttaaaatattat
ggacttcctgaaaattatgtctattatagagggagagggtgtgagtcctgtagatttaaa
ggctatcttggaagaactgtaattgcagaaattttttatatagatgaagactttattaaa
cttctttctaaagatgcaacctttccagaatttttagaacttgctaaatcaaaaaatatt
aaatttttaaaagatgatgctaaaagaaaagttttagaaggaataacaactgtggaagag
ataaaaagagtaattgggtaa
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