Thermodesulfobacterium geofontis: TOPB45_0973
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Entry
TOPB45_0973 CDS
T01547
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
top
Thermodesulfobacterium geofontis
Brite
KEGG Orthology (KO) [BR:
top00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
top03016
]
TOPB45_0973
Enzymes [BR:
top01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
TOPB45_0973
Transfer RNA biogenesis [BR:
top03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
TOPB45_0973
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Lipase_GDSL
Motif
Other DBs
NCBI-ProteinID:
AEH23068
UniProt:
F8C5T1
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All DBs
Position
complement(957857..959203)
Genome browser
AA seq
448 aa
AA seq
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MKKRVYIKTFGCQMNENDTEKMYILLSDEYEPTSNPEEADLILINTCSVREKPQFKAFSE
VGRYKYLKKKKPDLIIGVTGCVAQQEGEKLIQRLPYIDLVLGTQGFYFIKEALETLKKNK
KPVVFTELKPDFKPPLILDKENKLSLENKKVTAYVTIMQGCDNFCSYCIVPYVRGREISR
NPEDILKEVKELVKNGVREVTLLGQNVNSYGIKEKNYPDFPELLNMISQIENLWRIRFTT
SHPKDLSDKLIKVIAENPKVCKHIHLPLQAGSNKILKKMNRKYTKEEYLEKVEKLKDAVP
DIAITTDIIVGFPGESEEDFKETLEMLEKVRYHEIFSFKYSDRPFTLAQKLENKIPEEEK
ERRLKIVHQIQAKITKEIYESYVGKEVEVLVEGPSAKDPNMLMGRTTTNVIVNFNTPRLD
LKGALVKVLIKEAGKHSLKGEYLETLKL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagagtttatataaaaactttcggttgccagatgaatgaaaatgatacggag
aaaatgtatattttgctctcagatgaatatgagccaacttctaatcctgaagaagcagat
ttaattttaattaatacctgttctgtaagagaaaaacctcaatttaaagcttttagtgaa
gtaggaagatataaatacctcaaaaaaaagaaaccagatcttattattggagttacaggt
tgtgtagctcaacaagaaggcgagaaattaattcaacgacttccttatatagatttagtt
ttaggaacacaaggattttattttattaaagaagctttagaaacactcaaaaaaaataaa
aaacctgttgtttttacagagcttaaacctgactttaaacctccattaatacttgataaa
gaaaataaactttctcttgaaaataaaaaagttactgcttacgtaacaataatgcagggt
tgtgacaatttttgttcctattgtattgtcccttatgttagaggaagagaaataagtaga
aaccctgaagatattcttaaagaggttaaggagttagttaaaaatggagttagagaggtt
actcttttaggacaaaatgtaaattcctatggaattaaagaaaagaactatcctgatttc
cctgaacttttaaatatgatttctcaaatagaaaatctttggagaataagatttactaca
agtcatccaaaagatctttctgataaattaattaaggttatagctgaaaatccaaaagta
tgtaaacatattcatctacctttacaagctggttcaaataaaattctcaaaaaaatgaac
agaaaatacacaaaggaagaatatcttgaaaaggtggagaagttaaaagatgcagtgcct
gatattgctatcactactgatataattgtaggtttccccggagaaagtgaagaagatttt
aaagaaactctggaaatgcttgaaaaagtaagatatcatgaaatcttttcttttaagtat
tcagatagaccttttactctcgctcagaaattagaaaataaaattccagaggaggaaaaa
gaaagaagacttaaaatagttcatcagattcaagctaaaataactaaagaaatttatgaa
tcctatgtaggaaaagaggtagaggtattagttgaaggaccaagtgctaaagacccaaat
atgttaatgggaaggaccacaaccaatgtaattgtcaattttaatactcctcgtttagat
ttaaaaggtgctttagtaaaggttcttataaaagaagctggtaaacattctcttaaggga
gaatatttggaaactttaaaactataa
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