Thermodesulfobacterium geofontis: TOPB45_1075
Help
Entry
TOPB45_1075 CDS
T01547
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
top
Thermodesulfobacterium geofontis
Brite
KEGG Orthology (KO) [BR:
top00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
top03016
]
TOPB45_1075
Enzymes [BR:
top01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TOPB45_1075
Transfer RNA biogenesis [BR:
top03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TOPB45_1075
Prokaryotic type
TOPB45_1075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Lipoprotein_15
Motif
Other DBs
NCBI-ProteinID:
AEH23166
UniProt:
F8C4R5
LinkDB
All DBs
Position
complement(1068244..1069197)
Genome browser
AA seq
317 aa
AA seq
DB search
MEAKASLLNGILVIDKPQGLTSTETLEQVKKILKIKKAGHGGTLDPIATGVLPIFLNNTT
KLAEIFLEGDKIYEGEFQLGITTDTYDITGEILSKAEVPDISIEEIQEIANSFLGEIEQI
PPPFSATKYKGKPLYKYARDGIFIPKKPKKIKISEFKILGKEDSKIRFYLHCSKGTYVRS
LVHDLGKKLSCGAVLVNLRRLQKSIFTLDKSITLEKLKELYSQGLDKLMPFIIPPESALE
FLPKVIVSEDLSQRIKDGRQIHTSSFLSFIKFQKLVISPTEKWIRVVTTRGKLVAIIENP
LLNPSATYIKYFRVFKD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggaagctaaagcctccttattaaatggaattttagtaatagataagcctcaaggattg
acttctactgaaacattagaacaggttaaaaaaattttaaaaattaaaaaagctgggcat
ggaggaacgcttgatcctattgcaacaggagttttaccaatttttttaaataatactact
aagcttgcagaaatctttttagagggagataaaatatatgaaggtgaatttcaattaggg
ataactactgatacttatgatattacaggggaaatattaagtaaagcagaagttccagat
ataagtatagaagaaattcaagaaatagccaattcctttttaggagaaattgagcaaatc
ccccctcccttttctgctactaaatataaaggaaaaccgctttataaatacgctagagac
ggaatatttattcctaagaaaccaaaaaaaattaaaattagcgaatttaaaattcttgga
aaagaggattccaaaatccgtttttatcttcattgttctaaaggaacttatgtaaggtcc
ttagttcatgatttagggaaaaagctaagttgtggagctgttcttgtaaatttaagaaga
ttacaaaagagtatttttactttagataaatctataactttagaaaaactaaaagagctt
tattctcaaggattagataaattgatgccttttattatacctccggaatctgctcttgaa
tttttacctaaggttattgttagtgaagacctttcacaaagaataaaagacggtcgacag
attcatacatcttcttttctctctttcataaaatttcaaaaacttgttatttctcctaca
gaaaaatggataagggttgttactacaaggggaaaattagtagctattatagaaaatcca
ctcctaaatccctcagctacttatattaaatattttcgagtatttaaagattga
DBGET
integrated database retrieval system
