KEGG   Thermodesulfobacterium geofontis: TOPB45_1224
Entry
TOPB45_1224       CDS       T01547                                 
Name
(GenBank) CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
top  Thermodesulfobacterium geofontis
Brite
KEGG Orthology (KO) [BR:top00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:top02048]
    TOPB45_1224
Enzymes [BR:top01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TOPB45_1224
Prokaryotic defense system [BR:top02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    TOPB45_1224
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Helicase_C Cas3_HD ResIII HD HD-CE
Other DBs
NCBI-ProteinID: AEH23309
UniProt: F8C1Y1
LinkDB
Position
1217154..1219682
AA seq 842 aa
MIEIWAKRPKDGSIITLREHTKDLLDNLGKLYEKLPERLGNISKNDLFRLLKYACFFHDL
GKVSPIFQKTLGNVDYYNEYNKQLSTEIRHNILSLFFINKEKVKEICKSDEALYSTLLSA
VAFHHWREDEKEYLLGLNEDLKTTCEKLLKDSNGIKLEVILKEHFDGFSIEGFDAKDLIA
FDKDLAEHIKKAGNLISAGIIPPYTLYFLPERLRLERALEIDLNLWIFLSGFLMRIDHFS
SFCEKEAEIFEIEKEYPKLDLEAKFNEKFKESFWQKEVMKAIDDFKNKNVVLIAPTGLGK
TEFAFLWAEGEKFFYTLPLRVATNQIFERACSYFNITIHTDDDPFINGNVGLLHSDADLY
IVDKWETSRYTNWDGETPKIIEISKHFSLPVNISTGDQIFPSALKYPGYEKIYATLGYSK
LIIDEVQAYDPRACAIIVKMIEDIVSLGGKFLLMTATLPNFVRSELENKGIEFTEINLYE
GEIKECEEKRGTCKIEDITRHKLELIEKDIEEDIDEIIELACKGKRVLIVLNTVKKAISV
HGKIENSKYDGFLGLLHSEMTLNERKRREKELEKEFSNPKPEDEKEPKILVATQVVEASL
DIDADYLFTEIAPIDSLIQRMGRVMRRVDLMNGRIKGSNKEFSYEDFYEKEEANVIVYYQ
KDKNKIVESSKGKVYESELIQKAYKVLKDKKEIKEKEKQNLVVEFYENVEDEKNSKYLKK
FYETVRILNSGYVSENKNDAHELFREIYTISIVEEDKIEEIIRKINEAPKITWLWFKKEI
IAEYVINVNIWKYKDYPPKPLWNEEVEKKFEDETTRERLKRYFSGIYVVPKASPVNKGNI
ID
NT seq 2529 nt   +upstreamnt  +downstreamnt
atgatagaaatatgggcaaaaagacccaaagatggaagcataataaccttaagagaacat
acgaaggacctattagacaatcttgggaaattatacgaaaaattgcccgagagattagga
aatatatctaaaaacgacttattcaggctactaaaatatgcctgtttttttcatgacctt
gggaaggtctcaccaatctttcaaaaaactttaggaaatgtcgattactataatgagtat
aataaacagttatcaacagaaataaggcataacattctttctttgttctttattaacaaa
gaaaaagtaaaagaaatctgtaaatctgatgaagctttatattcaacattactttcagct
gtagcctttcatcattggagggaagatgaaaaggagtatttgttaggtttaaatgaagat
ttaaaaactacttgtgaaaaattacttaaggatagcaatggcataaaattagaagtaatc
ttaaaagaacatttcgatggtttttcgatagaaggttttgatgccaaagatttaatagct
tttgataaagaccttgctgaacatattaaaaaagctggaaatctaattagtgcaggtatt
atccctccctacactctttattttcttccagaaagactaagattagaaagagcattagaa
attgatttaaatctgtggatatttctttctggttttcttatgaggattgatcacttttct
tcattttgtgagaaagaagctgaaatttttgagatagaaaaggaatatcctaaattagac
ttagaagctaaatttaatgaaaagtttaaagaaagcttctggcaaaaagaagtaatgaaa
gctatagatgattttaaaaacaaaaatgttgtcttaatagcaccaacagggcttggtaaa
acagaatttgcttttttatgggcagaaggtgaaaaattcttctatacattacctttaagg
gttgctaccaatcagatatttgaaagggcttgtagttattttaacataaccattcatact
gatgacgacccgtttattaatggaaatgtagggcttttgcactcagacgctgatctatat
attgttgataaatgggaaacctcaagatatacaaactgggatggggaaacgcccaaaatt
attgaaatttcaaaacatttttccttaccagtaaatatatcaacaggagaccaaattttc
ccttctgctttaaaatatccaggttatgaaaaaatttatgcaaccttaggatattcaaaa
ctgataattgatgaggttcaggcatacgacccaagagcttgtgcgatcattgttaaaatg
atagaagatattgtttcccttggtggaaaatttctacttatgaccgctactttaccaaat
tttgtaagaagtgaattagaaaataagggaatagagtttacagaaattaatctatacgaa
ggagaaataaaagagtgtgaagaaaaaagaggaacttgcaaaatagaagacataacaaga
cacaagcttgagctaatagaaaaggatatagaagaagatattgatgagataattgaatta
gcatgtaaggggaaaagggttcttattgttttaaacactgtaaaaaaagcaattagtgtt
catggaaagattgagaatagcaagtatgacggatttttgggattactgcattctgaaatg
actttaaatgaaaggaagcgaagagaaaaagaattagagaaagagtttagtaatcctaaa
ccagaagatgagaaggagccaaaaatccttgttgcgacgcaagtcgtagaagcatcactt
gatattgatgccgactatttatttacggaaattgcccctattgactcattaatccaaaga
atgggaagggtaatgagaagggttgatttgatgaatgggagaataaaggggagtaataaa
gagtttagttatgaggatttttatgaaaaagaggaggcgaatgttatagtgtattatcaa
aaagataagaataaaattgtagagtcaagtaaaggtaaagtttatgaaagtgaattaatt
caaaaagcctataaagttttaaaagataaaaaagagattaaagaaaaggaaaaacaaaat
ttggttgttgaattttatgaaaatgttgaagatgaaaaaaattcgaaatatctaaaaaaa
ttttatgaaacagtgagaattcttaattcaggttatgtttccgaaaacaaaaatgatgca
cacgaattatttagagaaatctatacgatttctatagtggaggaagataaaattgaggag
ataattcgaaaaatcaatgaagcgcctaagataacttggctttggtttaaaaaggaaata
atagctgaatatgtgattaatgtaaatatctggaaatataaagactatccgcctaaacct
ctatggaatgaagaagttgaaaaaaagtttgaagatgagactacaagagagaggttaaag
agatatttttctggaatatatgtagttcctaaagcctctccagtaaacaagggaaacata
attgattga

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