Thermodesulfobacterium geofontis: TOPB45_1225
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Entry
TOPB45_1225 CDS
T01547
Name
(GenBank) CRISPR-associated protein Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
top
Thermodesulfobacterium geofontis
Brite
KEGG Orthology (KO) [BR:
top00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
top02048
]
TOPB45_1225
Enzymes [BR:
top01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
TOPB45_1225
Prokaryotic defense system [BR:
top02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
TOPB45_1225
Subtype I-B factors
TOPB45_1225
Subtype I-C factors
TOPB45_1225
Subtype I-D factors
TOPB45_1225
Type II CRISPR-Cas system
Subtype II-B factors
TOPB45_1225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas4
PDDEXK_1
PDDEXK_3
Motif
Other DBs
NCBI-ProteinID:
AEH23310
UniProt:
F8C4S9
LinkDB
All DBs
Position
1219675..1220184
Genome browser
AA seq
169 aa
AA seq
DB search
MIDEELTIKGIEVSYYIVCKRKLWLFSHGIDFERFSDDVEVGKIISESFFKKEKLKEVEI
GSAKIDFIKVKDEIIVNEIKKSKKLEEAHIWQTKFYIYTLEKLGIHAKRGIIHYPKLLKK
VEVELFEDDKIKLKEAFLKIEEIKHLEKPPAVQEKPYCRNCAYYEFCFS
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
ttgattgacgaagagttaaccataaaagggattgaggtatcttattacattgtttgtaaa
agaaaattatggctattttctcatggaattgattttgaaagattttcggatgatgtcgag
gttggcaaaattataagtgaatctttttttaaaaaagaaaaactaaaagaagtagaaata
ggtagcgctaaaattgattttattaaggtgaaagatgaaattatcgtaaatgaaataaaa
aagtccaagaaacttgaagaagcccatatttggcaaacaaaattttatatttatacttta
gaaaaattaggaattcacgccaaaagaggaataattcactacccgaaactgttaaaaaag
gttgaagtggaactatttgaagatgataaaataaagctgaaagaagcttttttaaaaata
gaagaaataaagcatcttgagaaaccacccgctgttcaagaaaaaccatattgtagaaat
tgtgcttattatgaattctgcttttcatga
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