Thermodesulfobacterium geofontis: TOPB45_1258
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Entry
TOPB45_1258 CDS
T01547
Name
(GenBank) transcriptional regulator, NifA, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
top
Thermodesulfobacterium geofontis
Pathway
top02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
top00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TOPB45_1258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
top03000
]
TOPB45_1258
Transcription factors [BR:
top03000
]
Prokaryotic type
Helix-turn-helix
Other families
TOPB45_1258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
GAF_2
GAF_3
AAA_5
AAA
Mg_chelatase
AAA_2
bpMoxR
MCM
Parvo_NS1
HTH_28
HTH_3
AAA_3
TIP49
AAA_16
nSTAND3
FAM177
DUF815
Torsin
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AEH23339
UniProt:
F8C281
LinkDB
All DBs
Position
1253485..1255038
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AA seq
517 aa
AA seq
DB search
MNALERKNAELTALLEISKILSSSFELEENIYRALKVLSDSLHMTRGTVTLLDPETSELR
IAVAYGLTREQIARGKYKIGEGIVGKVVETGSPIVVPDIGKEPLFLNRTRARINKDNISF
LCVPIKINEEILGVLSVDKIFDKSIDFEEDLRVLNIVATLIGQAIKLYRRFSEEKLKREE
LTLELRNRFSIQNIITVSDRMHEVIKTVIKVSKSKATVLLRGESGTGKELIAKAIHFESP
RAKGPFIAVNCAAIPETLLEAELFGYERGAFTGAVTAKPGKFELANGGTLFLDEIGETSP
ALQAKLLRVIQEYTFERLGGTKSINVDVRIIAATNKDLEDMVKKGLFREDLYWRLNVVSI
FLPPLRERKEDIPLLIEHFLKRFNKEYGRRISISSQAMEKLIRYSWPGNVRELENTIERL
VILAEKEEITVEDLPIHIRSEMLKTLNPSNTYSLKKEIEELEKRRIEEALKKCDYNQARA
ARLLGITQRQIGYKIKKYKILIPSFRAFASLQVGNIK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcttgaaagaaagaatgcggaattaacagctcttcttgaaataagtaaaatt
ttgagttcatcctttgaacttgaagaaaatatctacagagcacttaaagttctttctgat
tctcttcatatgacaagaggtactgtaactcttcttgatccagaaacatcagaattgaga
atagctgtagcttatggtctaacaagagaacaaatagcaagaggaaaatataaaatagga
gagggtatcgttggaaaggttgttgaaacaggttcacccattgttgtccctgatatcggg
aaagagcctttatttttaaatagaacaagagcaagaattaataaagataacatatccttt
ctttgtgtacccataaagataaatgaagaaattcttggtgtcctctctgtagataaaatt
tttgataaaagtatagattttgaagaggacttaagggtgctaaatattgtagctaccctt
attggacaggcaattaaactttatcggaggttttcagaagaaaaacttaaaagagaggag
cttaccttagagcttaggaatcgctttagcattcaaaatattattactgtttctgatagg
atgcatgaagttataaagactgtaattaaggtatcaaaaagcaaggcaacagtattactc
aggggagaaagtggaacaggaaaagagcttatcgctaaggcaattcattttgaaagtccc
agagcaaagggaccttttattgctgttaattgtgctgctattcctgaaaccctccttgaa
gcagaattatttggatatgaaagaggagcttttacaggtgcagtaacagcaaaaccaggt
aaatttgaacttgccaatgggggaaccctctttcttgatgagattggagaaacgagccct
gcccttcaagcaaaacttttgagagtgattcaagaatatacctttgaaagacttggtggt
acaaaatcaataaatgttgatgttagaataattgcagcaacaaacaaagatttagaggat
atggtaaagaaaggactctttagggaagacctttactggagattaaatgtagtttccata
tttcttccacctttaagagaaagaaaggaagatatacccctacttatagaacactttcta
aagagatttaataaggaatatggaagaagaatatctatttcttctcaggcgatggagaaa
ctaataagatattcatggcctggtaatgttagagaacttgaaaatactattgaaagactc
gttatccttgctgagaaagaagaaattactgttgaagatcttcccattcatatcaggtcc
gaaatgttaaaaactcttaatcctagtaatacctattctttaaaaaaagaaattgaggaa
ttagagaagagaagaatagaggaggctctaaaaaagtgtgattataatcaagctcgtgct
gctcgcttgcttggtattacccaaagacaaattgggtataaaataaaaaaatataaaatt
ttaattccttcatttcgagcttttgcctctcttcaagtaggaaacattaagtaa
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