Thermodesulfobacterium geofontis: TOPB45_1295
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Entry
TOPB45_1295 CDS
T01547
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
top
Thermodesulfobacterium geofontis
Pathway
top03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
top00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TOPB45_1295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
top03400
]
TOPB45_1295
Enzymes [BR:
top01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TOPB45_1295
DNA repair and recombination proteins [BR:
top03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TOPB45_1295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEH23376
UniProt:
F8C2B6
LinkDB
All DBs
Position
1295275..1295826
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AA seq
183 aa
AA seq
DB search
MNEDLEKLNEEIKNCKKCDLWKLRNNAVPGEGPSSAKIIIIGQAPGVQEDKTGRPFVGPA
GKFLNYLLELAGLKREEVFITSPLKCLPQPPINRKPKKKEIESCLPWLKKQIEIINPQKI
ILLGEVAFSVFFPDKNLKDFRGKKIKKEGKEFFITYHPAAGLRFPKIRKILEEDFKKFKN
LLT
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggatttggaaaaattaaatgaagaaatcaaaaattgtaaaaaatgtgatctt
tggaaattaagaaataatgcggtcccgggagaaggtccatcttctgcaaaaattataatt
ataggtcaagctcctggtgttcaggaagataaaactggaaggccctttgttgggccagct
ggaaaatttttaaattatcttttagagcttgctggcctaaaaagagaagaagtttttata
acctctcccttaaaatgtttacctcaacccccaattaatagaaaacctaaaaagaaagaa
attgaaagctgtcttccttggttaaaaaaacaaatagaaattattaacccccaaaaaatt
attttattaggtgaagtagctttttctgtatttttcccagataaaaatttaaaagatttt
agaggaaaaaagataaaaaaagagggtaaagaattttttattacttatcatccagcagca
ggcttaagatttccaaaaattaggaaaattttagaagaggattttaaaaaatttaagaac
ctacttacttag
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