Thermodesulfobacterium geofontis: TOPB45_1326
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Entry
TOPB45_1326 CDS
T01547
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
top
Thermodesulfobacterium geofontis
Pathway
top02020
Two-component system
top02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
top00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TOPB45_1326
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TOPB45_1326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
top03021
]
TOPB45_1326
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
top02035
]
TOPB45_1326
Transcription machinery [BR:
top03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TOPB45_1326
Bacterial motility proteins [BR:
top02035
]
Flagellar system
Flagellar assembly proteins
Stator
TOPB45_1326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
Sigma70_ECF
GerE
HTH_38
MarR_2
HTH_37
PhyR_sigma-like
SieB
HNH_repeat
Tweety
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AEH23407
UniProt:
F8C2L0
LinkDB
All DBs
Position
complement(1324443..1325180)
Genome browser
AA seq
245 aa
AA seq
DB search
MKEKLMNQIFLEKPPLEKLIEEFLPTINYWANRYVYYGMPVISKEDLVSAGLIGLIEAYH
RYDPSKNVKFKTYAEFRIKGAMLDEIRKLDIIPRSIKSKISDFEERLRKLYQELGRMPED
EEIAEFMELSLEEYYKFLESIKGITFIDIENLKQRFLELEEEDIFNFIAGDQREDPFEKY
ALKELQEKLEKALDCLSEKERLVLALYYYEGLTMKEIAKILDYTESRISQIHNKAILKLR
SLLNK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaattaatgaatcaaatttttttagaaaagccacccttagaaaaactgata
gaagaatttttacctacaattaattattgggcaaatagatatgtttattacgggatgcca
gtaattagtaaagaagaccttgtttctgctgggcttataggacttatagaagcttatcac
aggtatgatccttctaaaaatgtaaaatttaaaacctatgcagaatttagaattaaggga
gctatgcttgatgaaataagaaaattagatataataccaagaagtataaagagtaaaata
agtgattttgaagaaagattaagaaaactttatcaagaattgggtagaatgccagaggat
gaggaaattgcagaatttatggagcttagtttagaagaatattataagtttttagaaagt
ataaaaggaatcacttttattgatatagaaaatttaaagcaaagatttctagaattagaa
gaagaagatatatttaattttatagcaggagaccaaagagaggatccctttgaaaaatac
gctttaaaggaattacaagaaaaattggaaaaagctttagattgtctttcagaaaaagaa
agattggtgttagctttatattattatgaaggtttaactatgaaggaaattgcaaaaata
cttgattatacagaaagtagaatttctcaaatacataacaaagcaattttaaaacttaga
agccttttgaataaataa
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integrated database retrieval system
