Thermodesulfobacterium geofontis: TOPB45_1435
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Entry
TOPB45_1435 CDS
T01547
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
top
Thermodesulfobacterium geofontis
Pathway
top03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
top00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TOPB45_1435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
top03400
]
TOPB45_1435
Enzymes [BR:
top01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TOPB45_1435
DNA repair and recombination proteins [BR:
top03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TOPB45_1435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEH23515
UniProt:
F8C324
LinkDB
All DBs
Position
1431784..1432464
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AA seq
226 aa
AA seq
DB search
MDIAKEIKKYLIYLNELGFSYIPADENFKKLLKNNTYFSENNLEKIKNAIANCEKCPLCR
VRKQPIWGEGDLEAKLMLITEFPDKDEDFYGKPFVGAMEELLEKILKSINLTRKDFFITH
AVKCKTPGGRPPEFEEISACKTYLLKQIKFLNPKLILAFGFTPPKIFFDNNPTLSSIRGQ
PIKIKDSIILFTYHPNYMLKNPAVKRLLWEDLQKFRKFYEQIFKIS
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggatattgcaaaagaaattaaaaaatatcttatctacctaaatgaattgggatttagt
tatattcctgctgatgaaaattttaaaaaattattgaaaaataatacctatttctcagaa
aataatttagaaaaaattaaaaatgctatagctaattgtgaaaaatgtcctctttgtaga
gtaagaaaacaacctatatggggtgaaggagatttagaagcaaaacttatgcttattact
gagtttccagataaagacgaagatttttatggtaaaccatttgtaggagctatggaggaa
cttctagagaaaatattaaaaagtataaatttaacaagaaaagactttttcattacccat
gctgttaaatgtaagacccctggaggtagacctcctgaatttgaagaaatttcagcttgt
aaaacctatcttcttaaacagattaagtttttaaatcctaaacttattttagcttttgga
tttacacctccaaaaatcttttttgataataaccctaccctctcttctatcagaggacag
cctataaaaattaaagattctatcattctttttacttatcatcctaattatatgcttaaa
aacccagctgtaaaacgtttattatgggaagacttacaaaaatttaggaaattttatgaa
caaatttttaaaatttcttaa
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