Thermodesulfobacterium geofontis: TOPB45_1478
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Entry
TOPB45_1478 CDS
T01547
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
top
Thermodesulfobacterium geofontis
Brite
KEGG Orthology (KO) [BR:
top00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
top03021
]
TOPB45_1478
03009 Ribosome biogenesis [BR:
top03009
]
TOPB45_1478
Transcription machinery [BR:
top03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
TOPB45_1478
Ribosome biogenesis [BR:
top03009
]
Prokaryotic type
rRNA transcription factors
TOPB45_1478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_NusA_C
KH_1
KH_2
S1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEH23557
UniProt:
F8C3D0
LinkDB
All DBs
Position
complement(1476064..1477323)
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AA seq
419 aa
AA seq
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MPGELKRVIESLSKEKGLSKEIVVEALIEGIRTAAKKRFGNKARIEVKYDEEKGDIEIYK
LKKVVAEVKDKETEISLEEAQKIYPNIKIEDIIGERVELQDLGRIAAQIVKQLFSQKLRL
AEKHLIYDEYKYKIGEIVSGYVHRFDKRGVILSLGRAEALLPEEEQVPGEKYIRGHRLKA
LVIEVYRQQEPQIIVSRSHPAFVKKLFEKEVPEIQEGIVKIVAIAREPGSRTKIAVTSTN
PNIDPVGTCIGVRGSRISTILEELNIAKADKKEGKEKIDVVLWDPDPAKFVYNALAPAEC
SKVIVDEENKTLEVIVPDDQLSLAIGKKGENVRLASKLVGWRIDILSETQYLRRQEPEFL
RLLKVTGLSDEIAGYLYEANIKDLKTLVETPIEKIAELTKLPLEEVEKIVEKAKKEINA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgccgggagaattaaaaagggttatagaaagtttaagtaaagaaaagggtttatctaag
gagatagttgttgaggctttaattgaagggattagaactgcagcaaaaaaacgatttggt
aacaaagcccgtattgaagttaaatatgatgaagaaaagggtgatatagagatttacaaa
ttaaaaaaagtggtagcagaagttaaagataaggagacagaaatttccttagaagaggct
caaaagatttatcctaacattaaaattgaggacatcattggagaaagggtggaacttcaa
gatttaggacgtatagctgctcaaattgtaaaacaacttttttctcaaaaattaagactt
gcagagaaacaccttatatatgatgaatataaatataaaattggagaaatagttagtggg
tatgtacacagatttgacaaaagaggagtaattctttccttaggaagagcagaagctctt
ttacctgaggaagaacaagtacctggagaaaagtatattagagggcatagattgaaagct
ttggttatagaggtatatagacaacaggagcctcaaattatagtttctcgttcacatcca
gcttttgttaaaaaactttttgaaaaggaagtacctgaaattcaagaaggtatagttaaa
attgttgctatagcaagagaacccggttcaagaacaaaaattgcagttacctcgactaat
cccaatattgatcctgtaggaacctgtataggagtaagaggctcaaggatttctactatt
ttagaggaacttaatatagcaaaagctgataaaaaggaggggaaagaaaagatagatgta
gttttatgggatcctgatcctgctaaatttgtttataatgctttagctccagcagaatgt
agtaaagttatagtggatgaagaaaataaaactcttgaagttattgttcctgatgaccaa
ttgtcccttgctattggtaaaaagggagaaaatgttagacttgcttctaaacttgtagga
tggagaatagacattttaagcgaaacccagtatttgagacgtcaagaaccagaattttta
aggttacttaaagtaacaggattatctgatgaaattgcaggttatctttatgaagcaaat
attaaagatttgaaaactcttgtagaaacacctatagaaaaaattgctgaattaacaaag
ctacccttagaagaggtagaaaaaattgttgaaaaagctaagaaagagataaatgcctaa
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