Thermodesulfobacterium geofontis: TOPB45_1485
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Entry
TOPB45_1485 CDS
T01547
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
top
Thermodesulfobacterium geofontis
Pathway
top03030
DNA replication
top03430
Mismatch repair
top03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
top00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TOPB45_1485
03430 Mismatch repair
TOPB45_1485
03440 Homologous recombination
TOPB45_1485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
top03032
]
TOPB45_1485
03400 DNA repair and recombination proteins [BR:
top03400
]
TOPB45_1485
Enzymes [BR:
top01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TOPB45_1485
DNA replication proteins [BR:
top03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TOPB45_1485
DNA repair and recombination proteins [BR:
top03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TOPB45_1485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_3
DNA_pol3_beta
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
AEH23563
UniProt:
F8C3D6
LinkDB
All DBs
Position
1484390..1485511
Genome browser
AA seq
373 aa
AA seq
DB search
MNAKIETSRLEKILKKIEGVADKRASMAVLSMVLIEYKPTESYLHLLSTDLEIGYKGKIF
AEVEGEETSFCVPARKFYEIVKNFPEDEIYLIKDENRLVIKDAQERIVYNLAITDSEEFP
SLPEFIEENAIEIPGKVLAELISNTIFSTSKEESHFVLGGIYFEPIKEEGILRAVASDGH
RLVKLDREVIGIENVNFNEGFIVGRKAAKQIEDIAEEELIVKLGYINNYVVIWTSNSVFF
ARTIEGTYPDYRSVIPSHYENVLKVDRKLLMDALKRVSLIIPEKFKPVTFDLKPDEIILS
SQEVELGKAQIKLSAIYEGKPLTVNYNADYILDALEVMNSEEVEIKIGEERTPALITGRR
DEGFLYLVMPMIL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaaaaattgaaacctcaagattagaaaaaatattgaaaaaaattgaaggagtt
gcagacaaaagagcttctatggctgttttatctatggtcttgatagaatataaacctacg
gaaagctatctccatttgctttctactgatttggaaataggttataaaggaaaaatattt
gctgaagttgaaggagaggaaacctccttctgtgtgcctgcaagaaaattttatgaaata
gttaaaaactttcctgaagatgaaatttatttaattaaagacgagaatagattagttatt
aaggatgcacaggaaagaattgtatataatttagctattacagatagtgaagaattccca
agtttacctgaattcatagaagaaaatgctatagaaattccaggaaaggtcttagctgaa
cttatttcaaatactattttttctacctctaaagaagaaagtcattttgtattaggaggt
atttattttgaacctataaaagaggaaggtattttaagagctgttgcttcagatgggcat
agactggttaaacttgatagagaagtaataggaatagaaaatgtaaattttaacgaagga
tttatcgtgggaagaaaagctgctaaacaaatagaagatattgcagaagaagaattaata
gtaaaattggggtatataaacaattatgtagtaatatggacatcaaattcggtctttttt
gcaagaactattgaaggaacttatccagattatagaagcgtaataccttctcattatgaa
aatgttttaaaagtagatagaaaactgctaatggatgctttaaaaagggtgtctctaata
ataccagaaaaatttaaacctgttacttttgatctaaaacctgacgaaatcattctttct
tctcaagaagtagaattaggaaaagctcagattaagcttagtgctatttatgaaggaaaa
cctcttacagtaaattataatgcggattatattttagatgctttagaagtaatgaattca
gaagaagtagaaataaaaataggtgaagagagaactcctgctttaataaccggtagaaga
gacgaaggttttctttatttggtaatgcctatgatcttataa
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