KEGG   Thermodesulfobacterium geofontis: TOPB45_1515
Entry
TOPB45_1515       CDS       T01547                                 
Name
(GenBank) YcaO-domain protein
  KO
K09136  ribosomal protein S12 methylthiotransferase accessory factor
Organism
top  Thermodesulfobacterium geofontis
Brite
KEGG Orthology (KO) [BR:top00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:top03009]
    TOPB45_1515
Ribosome biogenesis [BR:top03009]
 Prokaryotic type
  ribosomal protein modification factors
   TOPB45_1515
SSDB
Motif
Pfam: YcaO TPR_2 TPR_1 TPR_8 TPR_11 TPR_12 CFAP70_TPR_C TPR_14 TPR_6 TPR_7 TPR_CcmH_CycH TPR_15 TPR-S TPR_16 TPR_19 DUF7017 ANAPC3 TPR_9 RMD1-3 TTC22_C PPR TPR_NPHP3 TPR_Psidin_N TPR_leprecan ARM_TT21_C HIR3_helical MRP-S27
Other DBs
NCBI-ProteinID: AEH23593
UniProt: F8C3G3
LinkDB
Position
complement(1517153..1518895)
AA seq 580 aa
MRELREKFLKSSKKVIADKAKFPEETVKEVEERLKLAGIRIYKGLKRIDKGRLGIPIYLS
LYDIDGQKITGNFKQMGKGSTETLSQASALMELVERFSLFSFYKEIQKKGILSTFEELKE
KAIPFNEILKSVEDEESEDIKKLAIKYLKEVPFYFVKAFEVATQKEKFIPFHWFWLLYEY
NGSAGGNTYPEASVQAICELIERHTNTLSVRKNAPMPAIKRDSIQGEGEKLINCYERLNI
KLWIRDMTFGMPVPTVAVMAMDPSTYPERSEIVYAAGTATSPERALIRALTEVAQLAGDF
DTEGKYVESGLPKFKTLEEAKNVIEWTYQVDLKDLPNISSEDHVEEMLNLSQKLKEIGYE
IYLIDITHPQLNIPAVYAIIPGVLFRERTRISYLYQMVRTLNLYLPKEKLKELLLSLLKE
IKDKYYLWAYLGNIYKEIGRENEAIDCYQKALEFFPPPADKLAIISHLADAYFRKGEYEK
VLNLVAMALEIDEIPELYNILGRAYYKLGNYLKAMEAFSRAIDLNPASAVDYANIGYCLK
AINYLPVAQIYFKKALEIDPELTMAKRGLEYCERILNSKN
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgagagaattgagggaaaaatttttaaaaagttctaaaaaagttatagctgataaggct
aaatttccagaagaaacagtaaaagaagtagaagaaaggctaaaattagcaggaattaga
atttataaggggcttaaaagaattgataaagggagattagggattcctatttatttaagt
ctctatgacatagatggacaaaaaattaccggaaattttaaacaaatggggaagggaagc
acagaaacactttcccaggcaagtgcgcttatggaattagtggaaagattttctttattt
tctttctataaagaaattcaaaaaaaggggatattaagtacttttgaggaattaaaagaa
aaggctatcccttttaatgaaattttaaaatctgtagaagatgaagaatcggaagatatt
aaaaaattagctattaaatatttaaaagaagttcctttttattttgttaaagcttttgaa
gtagccacacaaaaagaaaaatttatccctttccactggttttggcttctttatgaatac
aatggttctgcaggaggaaatacctatcctgaagcaagtgttcaagcaatatgtgaatta
atagaaagacatactaatactttatctgttaggaaaaacgcacctatgcctgctataaaa
agagattctattcagggagaaggagaaaaattaataaattgttatgaaagattaaatata
aaattgtggataagagatatgacttttggtatgccagttcctacagtagctgtaatggct
atggatccttctacctatcctgaaaggagtgaaattgtgtatgcagcaggaacagcaact
tcgcctgaaagggcattaataagagctttaacagaagttgctcaacttgcaggagatttt
gatacagagggcaaatatgtagaaagtggacttcctaaatttaaaacacttgaagaagct
aaaaatgttattgaatggacttaccaagttgatcttaaagatctacctaatatatcttct
gaagatcatgtagaagaaatgctcaatctttcccaaaaattgaaagaaattggttacgaa
atttatttaatagatatcacccatcctcaactaaatattcctgcagtttatgcaataatt
cctggagttctttttagagaaagaactcgcatttcttatctttaccaaatggtgagaact
ttgaatttatatttgccaaaagaaaaattgaaagaacttcttttatctcttttaaaagaa
ataaaagacaaatactatctctgggcttatttagggaatatttacaaagagataggtaga
gaaaatgaagctatagattgttatcaaaaggctttagaattttttcctccaccagcagat
aaattagccataatttcacaccttgcagatgcctattttagaaaaggagaatatgaaaaa
gttttaaatttagtggcaatggctttagaaatagatgaaattccagaactttataatatt
ttaggaagagcttattataagttaggaaattatttaaaagctatggaggcattttcaagg
gcaatagatctaaatcctgcttcagcagttgattatgcaaatataggatattgtttaaaa
gcaattaattatctacctgttgctcaaatttattttaaaaaagctcttgaaattgatcca
gaattgacaatggctaaaagaggtttagaatattgcgaaaggattcttaattctaaaaat
taa

DBGET integrated database retrieval system