Thermodesulfobacterium geofontis: TOPB45_1515
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Entry
TOPB45_1515 CDS
T01547
Name
(GenBank) YcaO-domain protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
top
Thermodesulfobacterium geofontis
Brite
KEGG Orthology (KO) [BR:
top00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
top03009
]
TOPB45_1515
Ribosome biogenesis [BR:
top03009
]
Prokaryotic type
ribosomal protein modification factors
TOPB45_1515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
TPR_2
TPR_1
TPR_8
TPR_11
TPR_12
CFAP70_TPR_C
TPR_14
TPR_6
TPR_7
TPR_CcmH_CycH
TPR_15
TPR-S
TPR_16
TPR_19
DUF7017
ANAPC3
TPR_9
RMD1-3
TTC22_C
PPR
TPR_NPHP3
TPR_Psidin_N
TPR_leprecan
ARM_TT21_C
HIR3_helical
MRP-S27
Motif
Other DBs
NCBI-ProteinID:
AEH23593
UniProt:
F8C3G3
LinkDB
All DBs
Position
complement(1517153..1518895)
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AA seq
580 aa
AA seq
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MRELREKFLKSSKKVIADKAKFPEETVKEVEERLKLAGIRIYKGLKRIDKGRLGIPIYLS
LYDIDGQKITGNFKQMGKGSTETLSQASALMELVERFSLFSFYKEIQKKGILSTFEELKE
KAIPFNEILKSVEDEESEDIKKLAIKYLKEVPFYFVKAFEVATQKEKFIPFHWFWLLYEY
NGSAGGNTYPEASVQAICELIERHTNTLSVRKNAPMPAIKRDSIQGEGEKLINCYERLNI
KLWIRDMTFGMPVPTVAVMAMDPSTYPERSEIVYAAGTATSPERALIRALTEVAQLAGDF
DTEGKYVESGLPKFKTLEEAKNVIEWTYQVDLKDLPNISSEDHVEEMLNLSQKLKEIGYE
IYLIDITHPQLNIPAVYAIIPGVLFRERTRISYLYQMVRTLNLYLPKEKLKELLLSLLKE
IKDKYYLWAYLGNIYKEIGRENEAIDCYQKALEFFPPPADKLAIISHLADAYFRKGEYEK
VLNLVAMALEIDEIPELYNILGRAYYKLGNYLKAMEAFSRAIDLNPASAVDYANIGYCLK
AINYLPVAQIYFKKALEIDPELTMAKRGLEYCERILNSKN
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattgagggaaaaatttttaaaaagttctaaaaaagttatagctgataaggct
aaatttccagaagaaacagtaaaagaagtagaagaaaggctaaaattagcaggaattaga
atttataaggggcttaaaagaattgataaagggagattagggattcctatttatttaagt
ctctatgacatagatggacaaaaaattaccggaaattttaaacaaatggggaagggaagc
acagaaacactttcccaggcaagtgcgcttatggaattagtggaaagattttctttattt
tctttctataaagaaattcaaaaaaaggggatattaagtacttttgaggaattaaaagaa
aaggctatcccttttaatgaaattttaaaatctgtagaagatgaagaatcggaagatatt
aaaaaattagctattaaatatttaaaagaagttcctttttattttgttaaagcttttgaa
gtagccacacaaaaagaaaaatttatccctttccactggttttggcttctttatgaatac
aatggttctgcaggaggaaatacctatcctgaagcaagtgttcaagcaatatgtgaatta
atagaaagacatactaatactttatctgttaggaaaaacgcacctatgcctgctataaaa
agagattctattcagggagaaggagaaaaattaataaattgttatgaaagattaaatata
aaattgtggataagagatatgacttttggtatgccagttcctacagtagctgtaatggct
atggatccttctacctatcctgaaaggagtgaaattgtgtatgcagcaggaacagcaact
tcgcctgaaagggcattaataagagctttaacagaagttgctcaacttgcaggagatttt
gatacagagggcaaatatgtagaaagtggacttcctaaatttaaaacacttgaagaagct
aaaaatgttattgaatggacttaccaagttgatcttaaagatctacctaatatatcttct
gaagatcatgtagaagaaatgctcaatctttcccaaaaattgaaagaaattggttacgaa
atttatttaatagatatcacccatcctcaactaaatattcctgcagtttatgcaataatt
cctggagttctttttagagaaagaactcgcatttcttatctttaccaaatggtgagaact
ttgaatttatatttgccaaaagaaaaattgaaagaacttcttttatctcttttaaaagaa
ataaaagacaaatactatctctgggcttatttagggaatatttacaaagagataggtaga
gaaaatgaagctatagattgttatcaaaaggctttagaattttttcctccaccagcagat
aaattagccataatttcacaccttgcagatgcctattttagaaaaggagaatatgaaaaa
gttttaaatttagtggcaatggctttagaaatagatgaaattccagaactttataatatt
ttaggaagagcttattataagttaggaaattatttaaaagctatggaggcattttcaagg
gcaatagatctaaatcctgcttcagcagttgattatgcaaatataggatattgtttaaaa
gcaattaattatctacctgttgctcaaatttattttaaaaaagctcttgaaattgatcca
gaattgacaatggctaaaagaggtttagaatattgcgaaaggattcttaattctaaaaat
taa
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