Thermodesulfobacterium geofontis: TOPB45_1560
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Entry
TOPB45_1560 CDS
T01547
Name
(GenBank) L-seryl-tRNA(Sec) selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
top
Thermodesulfobacterium geofontis
Pathway
top00450
Selenocompound metabolism
top00970
Aminoacyl-tRNA biosynthesis
top01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
top00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
TOPB45_1560
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TOPB45_1560
Enzymes [BR:
top01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
TOPB45_1560
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Gene cluster
GFIT
Motif
Pfam:
SelA
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
BAR
DUF6387
Csa3_N
vRNAP_dom
MHC_I
DegT_DnrJ_EryC1
HexPS-like
Motif
Other DBs
NCBI-ProteinID:
AEH23638
UniProt:
F8C3S1
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All DBs
Position
complement(1562690..1564069)
Genome browser
AA seq
459 aa
AA seq
DB search
MRIPSVNELKEKFSKLYPNYPISYFTEPSRRVAQIIREKWQKKELQKLEESYLENLMKEV
FKKYETPSLKRVINATGVVIHTNLGRAPLCKKAIEEITKVAKYYSNLEFDLKEGKRGSRY
VHVEEILKEITQAESALIVNNNAAAVLISLNTLAYGKEVIVSRGELVEIGGSFRIPEVMK
WAGCILKEVGTTNKTHLSDYENAINENTALLLKVHKSNFEIIGFAKEVSVEDLVTLGKKF
GLPVMKDLGSGCFIDFSKYGLKKEPTVQEVLKAGVDIVTFSGDKLLGGPQAGIILGKKEF
IEKIRKNPLNRALRIDKLTLAGLEATLRLYRDENLALEHIPVLKMILTPKEILKKRAKYL
LKKLRKLKLKEFNFEVIETINKTGGGALPTLDLISYAVAVKSPLSPQNLQKILRENEPPI
ITRIEEERLLIDVRCLFDEDYKEIISAFEKFGNDKKYTS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattccttcagtaaatgaattaaaagaaaaattttcaaaactttatcctaattat
cctatatcttattttacagaaccttcaagaagagtagctcaaattataagagaaaaatgg
caaaaaaaagaacttcaaaaacttgaagaatcttacttagaaaacttaatgaaagaagtc
tttaaaaaatatgaaactccgtctttaaaaagagtgataaatgcaactggagtagtaatt
catactaatttggggagagctccactttgtaaaaaagcgatagaagagataacaaaagta
gcgaaatattattccaatttagaatttgatttaaaggaagggaaaagaggaagtagatat
gttcatgtagaagaaatattaaaagaaattacccaagctgaaagtgctttaatagtaaat
aacaatgcagcagctgtgttaatttctttaaataccttagcctatggaaaagaggttata
gtatcaagaggagagcttgttgagattggaggatcttttagaatacctgaagtgatgaaa
tgggcagggtgtattttaaaggaagtaggaactactaataaaactcatttatctgattat
gaaaatgctatcaatgaaaatactgctttacttttaaaagtacataaaagtaattttgag
ataataggttttgctaaagaagtttcagtagaggatttggtaactctgggtaaaaaattt
ggacttccagtcatgaaagatcttgggagtggatgttttatcgatttttccaaatatgga
ttaaaaaaagaacctactgtacaagaagttctgaaggcaggggttgatattgttactttt
tcaggagataaacttttaggaggtcctcaagcgggaattattcttgggaaaaaagaattt
atagaaaaaataagaaaaaatcccttaaatcgtgccttaagaattgataagctaacctta
gctggtttagaagcaactttaagattatatagagatgaaaacctcgctttagagcacatt
cctgtacttaaaatgattttaactcctaaggaaattttgaagaaaagagcaaaatatctt
ttaaaaaaacttagaaaacttaaacttaaagaatttaattttgaagtgattgagactatc
aataaaaccggaggaggggctcttcccactttagatttaatttcttatgcagtagctgta
aaatctcccctttctccccaaaacttacaaaaaattctgagagaaaatgaacctcctata
ataacaagaatagaagaagaaagacttttaattgacgtaaggtgtctttttgatgaggac
tataaagaaataatttccgcatttgaaaagtttggaaatgataaaaaatatacctcctaa
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