Tolypothrix sp. PCC 7910: HCG51_05475
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Entry
HCG51_05475 CDS
T06504
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
toq
Tolypothrix sp. PCC 7910
Pathway
toq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
toq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HCG51_05475 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
toq03400
]
HCG51_05475 (uvrB)
DNA repair and recombination proteins [BR:
toq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HCG51_05475 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HCG51_05475 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_19
AAA
AAA_22
Tuftelin_like
HEM4
AAA_16
HerA_C
DUF8082
UB2H
Motif
Other DBs
NCBI-ProteinID:
QIR36264
LinkDB
All DBs
Position
1384662..1386659
Genome browser
AA seq
665 aa
AA seq
DB search
MTEFSLQAPFSPTGDQPQAIAQLAASIKAGNRYQTLLGATGTGKTYSVAAVIEKVGRPTL
VLAHNKTLAAQLCNELREFFPNNAVEYFVSYYDYYQPEAYIPVTDTYIEKTASINDEIDM
LRHSATRSLFERRDVIVVASISCIYGLGMPAEYFKAAIPLQIGMEVNQRQILRDLASVQY
SRNDLEMGRGKFRVRGDVLEIGPAYEDRIIRVEFFGDEIDAIRYIDPVTGEIINSLQAVN
IYPARHFVTPEERLGVACDDIAAELKQRKAELEEAGKLLEAQRIDQRTRYDLEMLREVGY
CNGVENYSRHLAGRQAGEPPECLIDYFPKDWLLVIDESHVTVPQIRGMYNGDQARKKVLI
EHGFRLPSAADNRPLKAEEFWEKVNQCIFVSATPGTWELEISDSNIVEQVIRPTGVIDPE
IFVRPTEGQIDDLLGEIKDRVDRHERVLVTTLTKRMAEDLTEYLEDNGIRVRYLHSEINS
IERIEILQDLRSGKFDVLVGVNLLREGLDLPEVSLVAIMDADKEGFLRAERSLIQTIGRA
ARHIKGQAIMYADNLTDSMIKAIEETDRRRAIQTAYNKMHGITPQPIVKKSSNAILSFLD
VSRRLNATDLKVVDEHIDELPLEEIPDLIAKLEAQMKEAAKKLEFEEAANLRDRIKHLRD
KMLGH
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatttagtctgcaagctccctttagtccgacaggcgatcaaccacaagcgatc
gcacaactagcagccagtatcaaagctgggaatcgttaccaaaccttactgggtgctacg
ggaaccggtaagacatattcagtagcagcagtgattgagaaagttggtaggcctaccttg
gtgctggcgcataacaaaactttggctgcacaactttgtaacgaattgcgggaattcttt
cccaataatgccgttgaatattttgttagttactacgattattatcagccggaagcgtac
attcccgtaaccgatacttatattgagaaaacagcttccattaatgatgaaatagatatg
ttgcggcactcagcaacgcgatcgctttttgaacgtcgtgatgtgattgtagttgcttcc
attagctgcatctacggtttgggaatgccagctgaatatttcaaagctgctataccccta
caaattgggatggaagtcaaccaacgccagattttgcgagacttagcatctgtgcagtat
agccgcaacgatttagaaatgggtcgcggaaaatttcgcgtccggggagatgtcttagaa
attggcccagcctacgaagaccggattattcgggtagaattttttggcgatgaaattgat
gcaattcgctatattgaccccgtaacaggtgaaattattaatagcctgcaagccgtcaat
atctaccccgcacgtcactttgttaccccagaagaacgtttaggagtagcttgtgatgat
attgcggctgaactgaaacaacgcaaagctgaattagaggaagcagggaaattattagaa
gcgcaacgtatagatcagcgcacccgctatgatttagaaatgttgcgtgaagttggttac
tgtaacggcgtagaaaactattcgcgtcaccttgcgggtagacaagcaggggaaccacca
gaatgtttaattgattattttcctaaagattggctgttagttattgatgaatctcatgtg
acagtaccgcaaattcgcgggatgtataacggcgaccaagctaggaagaaagtgttaatt
gaacatggatttcggcttcccagcgctgctgataaccgtccattaaaagcagaagaattc
tgggaaaaggtaaatcagtgcattttcgtttctgctaccccaggaacttgggaattagaa
atttctgatagcaatatagttgagcaagtaattcgacccacgggtgttattgatccagaa
attttcgtgcgtcctacggaaggtcaaattgatgatttattaggagagattaaagacaga
gttgaccgccacgaaagagttttagtaaccactttaactaagcgaatggcggaagattta
acagaatatttagaagataacggcattcgtgtccgctatttgcattcagaaatcaattct
attgaacggattgaaattttacaagatttgcgatcaggtaagtttgatgtcttagtggga
gtcaacttattgcgggaaggtttggatttaccagaagtttccctcgtcgccatcatggat
gcagataaagaaggatttttgcgcgctgaacgttctttaattcaaacaattggtagagct
gcacgtcatattaagggacaggcaatcatgtatgctgataaccttacagatagcatgatt
aaagccattgaagaaacagacagaaggcgggcaattcaaacggcttataacaaaatgcat
gggattacacctcagccaattgtgaaaaaatcaagtaacgcgattttgtcatttttagat
gtttctcgacggttaaatgctacagatttaaaagtagtagacgaacatatcgatgaacta
ccgctagaagaaattcccgacttaattgctaaactcgaagcgcagatgaaagaagccgcg
aaaaaactagaatttgaggaggctgcaaacttgcgcgatcgcattaagcacctgcgggat
aaaatgctgggacattag
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