Tolypothrix sp. PCC 7910: HCG51_06815
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Entry
HCG51_06815 CDS
T06504
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
toq
Tolypothrix sp. PCC 7910
Pathway
toq03410
Base excision repair
toq03430
Mismatch repair
toq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
toq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HCG51_06815
03430 Mismatch repair
HCG51_06815
03440 Homologous recombination
HCG51_06815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
toq03400
]
HCG51_06815
DNA repair and recombination proteins [BR:
toq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HCG51_06815
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HCG51_06815
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HCG51_06815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QIR36493
LinkDB
All DBs
Position
complement(1691468..1693597)
Genome browser
AA seq
709 aa
AA seq
DB search
MLDIARSETSKPRRRLPNQRWQIYPQKAEFAQKLAISNHISPIVSQLLINRGIETLEAAQ
AFLEPESLILPAPLEEFPDLALSVELLQNAIASEEKIAICGDYDADGMTSTALLLRSLRA
LGAKVDYAIPSRMHDGYGINKRIVEEFHSEGVGIILTVDNGISAVEPIARARELGLKVIV
TDHHDIPQQLPPANAILNPKLIAESSPYHGVAGVGVAYILAVSLAQQLGETRGLIQPMLA
LFTLGTIADLAPLTGVNRRWVKRGLQLLPKSHLPGIQALIQMAGVQAREQGDKGTRGQGE
GGAEEQGSNPKSKIQNLKSLKPEDIGFKLGPRINAIGRIGDPQIVIDLLTTDDMGIALER
AMQCESVNQQRQEMCEQIEQEAIAYVETEFITSLPQDRVLVVVQPNWHHGVIGIVASRLV
ERYGVPVFIGTYEDDTHIRGSARGIPEFNVFEALQACHDLLGKYGGHKAAGGFSLPAPNL
AKMRSRLIEFANQCLEPQHLKPLLKIDTEVNFSEINHQLYQQLNTLHPCGIDNPDPVFWT
PNVQVVEQQIVGKGHIKLTLAQTIEQQQYKIKAIAWRWRDYYPLPSRVDVAYKLRENHFN
GNTTIEMELIGVRLPTQSHLFLSSSTRPLTTKFEYKQRHYTCGIFQQNSFPELRIKNSEG
KVLVMQPGHTIGLLGNSREDAKEVDVCEPQYDSIIQAALQALSVLSSKS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacattgctcgctcggaaacatcaaaacctcgcaggcgcttaccgaatcagcgt
tggcaaatttacccacaaaaggctgaatttgctcaaaagttagctatatccaaccatatt
tcaccaattgttagccagcttttgattaaccggggtattgaaaccctagaagcagcacaa
gcctttttagagccagaatcgttaattttacctgcaccactagaagaatttcccgattta
gcgctgagtgtcgagttactgcaaaatgcgatcgcttctgaagaaaaaattgcgatttgc
ggtgactacgatgcggatggaatgactagcacggctttactattacggagtctccgcgct
ttgggtgcgaaagttgattacgctatccccagccggatgcacgatggttatggtatcaat
aaacgaattgtcgaagaattccacagtgaaggcgtagggataattctcactgttgataat
gggatctccgcagttgaacccatcgccagagccagagaactaggattaaaggtaattgtc
accgatcatcacgacattccgcaacaattaccaccagctaacgccattctcaacccgaaa
ttaatcgccgaatcttcaccctatcacggtgttgcgggtgtaggtgtcgcctatatcttg
gcggtatctctcgcacaacagctaggcgagactagaggcttaattcagccgatgctagca
ctgtttaccttgggaacgatcgcagatttagcacccttaacaggcgtaaaccgtcgctgg
gtaaaacgcggtttacaacttttacccaaatcccatttaccaggaatacaagccttaatt
caaatggctggagttcaagcgagggaacaaggggacaaggggacaaggggacaaggggaa
gggggagccgaggagcaggggagcaatccaaaatccaaaatccaaaatctaaaatcctta
aagcctgaagatattggctttaaactggggccgagaattaatgctatcggtagaattggc
gatccgcagattgtgattgatttgctgactacagatgatatggggatagcgctggaaaga
gcaatgcagtgcgaatctgtgaaccaacagcgccaggaaatgtgcgaacaaattgaacaa
gaagcgatcgcttatgtagaaactgaatttatcacatcactcccccaagacagagtatta
gttgttgtccaaccaaactggcatcatggtgtcattgggattgtcgcttctcgtttggtg
gaacgttacggtgtgccagtatttattggtacttatgaagatgacacccatattcgcggt
tccgccagaggaattcccgaatttaatgtatttgaagccttacaagcttgtcacgactta
ctaggtaaatatggtggacacaaagctgccgggggtttttctttaccagcaccgaattta
gcaaaaatgcgatcgcgtttaattgagtttgcaaatcaatgtctggaaccccagcacctc
aagccgctattaaaaattgataccgaagtcaattttagtgaaatcaatcaccagctttat
caacagcttaatactttgcatccctgcggtatcgataaccccgatcccgtcttctggact
cctaatgtgcaagtagttgagcaacaaatagtcgggaagggtcatatcaaactcacacta
gcccaaactatcgagcagcaacaatataaaattaaggcgatcgcttggcgttggcgcgac
tactatcccctaccgtcgcgagtggatgtagcttataaactacgagaaaatcattttaac
ggcaataccacaattgagatggaactaataggtgtgcggctaccaacgcaatctcacctg
tttttgagttcctcaactcgtccgttaacaaccaagtttgagtacaaacagcgccattac
acttgtggtatctttcaacagaattctttcccagaattaaggattaaaaattctgaaggc
aaagtcttagttatgcaaccagggcatacaatcggtttgctgggtaatagtcgtgaagat
gccaaagaggttgatgtctgtgaaccacaatatgacagcatcatccaagctgcacttcag
gctttgtcagtgctgagttccaagtcctga
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