Tolypothrix sp. PCC 7910: HCG51_14825
Help
Entry
HCG51_14825 CDS
T06504
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
toq
Tolypothrix sp. PCC 7910
Pathway
toq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
toq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HCG51_14825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
toq03019
]
HCG51_14825
03009 Ribosome biogenesis [BR:
toq03009
]
HCG51_14825
Enzymes [BR:
toq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HCG51_14825
Messenger RNA biogenesis [BR:
toq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HCG51_14825
Ribosome biogenesis [BR:
toq03009
]
Prokaryotic type
rRNA helicases
HCG51_14825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
HEM4
Cas3-like_C_2
ADAMTSL1
Sigma70_r4
AAA_22
VpsR
Motif
Other DBs
NCBI-ProteinID:
QIR37859
UniProt:
A0A6G9SI70
LinkDB
All DBs
Position
3733565..3735100
Genome browser
AA seq
511 aa
AA seq
DB search
MNLSFQELGISQERVEQLEKIGFTTPTNIQTQAIPQLLAGRDVVGQSQTGTGKTAAFSLP
ILERLDVSQRAVQALVLTPTRELAMQVHDAIAQFIGDEGLRVLAIYGGQSIDRQILQLRR
GVHMVVGTPGRVIDLLDRGCLKLDQVKWFVLDEADEMLSMGFIDDVIKILSQAPEERQTA
LFSATMPPSIRQLVNKFLRSPATVTVEQPKAAPTKINQVAYLIPRHWTKAKALQPILEME
DPESALIFVRTRRTAAELTSQLQAAGHSVDEYHGDLSQQARERLLSRFRNRQVRWVVATD
IAARGLDVDQLSHVINYDLPDSVETYVHRIGRTGRAGKEGTAISLVQPFERRKQQIFERH
NRQSWQLLSIPTRAQIEARHINKLQEQVREALTGERLASFLPIVSELIEKYDAQAIAAAA
LQIAYDQTRPAWLSSDIEIPQEENIATPKPKLVKQRRDGSGDRSRSNWSKSDNMGEDERR
STPKPKLRTGRRDASPVNHKLGSSPARESAS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttcgtttcaagaactaggcatttcacaagaacgtgttgaacaactagaaaaa
attggtttcaccacaccaaccaatattcaaactcaagcaattccccaacttctagctgga
cgcgatgttgttggacaatctcaaacaggaactggtaaaaccgcagctttttcgctgcca
attctagagcggctagatgtgagtcaaagagccgtgcaagcactggtgttaacaccaact
cgtgaattagccatgcaggttcacgatgcgatcgcccaatttattggtgatgaaggattg
cgggtgttagcaatctacggtggtcaatctattgatcgccaaattttacaacttcgacgt
ggtgtccacatggttgtgggtactcctggacgggtaattgacttgttagatcgcggctgt
ttgaagctcgatcaagttaagtggtttgttctagatgaagccgatgaaatgttgagcatg
ggctttatcgacgatgtcattaaaatcttgtcccaagcgccagaagaacggcaaacagcg
ctattctcagcgacaatgccgccatcaattcggcaattggtgaacaagtttttgcgatcg
cctgcgacagttaccgtcgaacagccaaaagctgctcctaccaaaattaatcaggtagct
tacctgattcctcgccactggacaaaagccaaagctttacagcccattctggaaatggaa
gatccagaatcagcattgatatttgttcgtaccagacgcaccgcagctgaactcactagt
caactgcaagccgctggacacagtgtcgatgaataccacggtgatttatctcagcaagct
agagaacgcttgctcagccgattccgcaatcgccaagtacgctgggtagtagcaaccgat
attgcagcccgggggttagatgtagatcaactatctcatgtgatcaactacgacttaccc
gatagcgtagaaacctacgtccaccgtattggtcgtactggtcgtgctggtaaagaagga
acagcgatttcactagtacaaccatttgagcgccgcaagcagcaaatctttgaacgtcat
aaccgtcaaagttggcaattgctttcaatccccacccgggcacaaattgaagcgcggcac
atcaataaattgcaagaacaagtcagagaagctttaacaggcgaacgcctagcttcattc
ttacccatagtcagcgaactgatcgaaaaatacgatgctcaagcgatcgcagctgcggca
ttgcaaattgcttatgatcaaactcgtccagcttggttaagttcagacattgaaattccc
caagaagaaaacatcgcgactcctaaacccaagttggtaaaacagcgtcgtgatggttca
ggcgatcgttcccgttctaattggagcaaatcagacaacatgggcgaagacgaaagacgt
tctacccccaagccaaaattgcggacaggtcgtcgtgatgcttctcctgttaaccacaag
ctaggttcttctccagctagagaatctgcttcataa
DBGET
integrated database retrieval system
