Tolypothrix sp. PCC 7910: HCG51_19490
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Entry
HCG51_19490 CDS
T06504
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
toq
Tolypothrix sp. PCC 7910
Pathway
toq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
toq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HCG51_19490 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
toq03019
]
HCG51_19490 (recQ)
03400 DNA repair and recombination proteins [BR:
toq03400
]
HCG51_19490 (recQ)
Enzymes [BR:
toq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HCG51_19490 (recQ)
Messenger RNA biogenesis [BR:
toq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HCG51_19490 (recQ)
DNA repair and recombination proteins [BR:
toq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HCG51_19490 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
TnsD
Helicase_Sgs1
GerE
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QIR41507
LinkDB
All DBs
Position
4896412..4898574
Genome browser
AA seq
720 aa
AA seq
DB search
MLQYPNLEQALKYHFGYDRFRPGQRQIIEDALQNRDLMVVMPTGGGKSLCFQLPALLKKG
LTVVVSPLIALMQDQVEALRNNNISATFLNSSLNAYKVRSREEAILSGKVKLLYVAPERL
LSERFLPFLDLVNHQVGISTFAIDEAHCVSEWGHDFRPEYRQLRSLRQRYPNIPAVALTA
TATDRVRSDIIQQLGLKQPSIHIASFNRQNLYYEIRSKSKSAYAELLELIRETQGSAIIY
CLTRKKVDELTFKLQNDKISAIPYHAGLTDDERTKNQTRFIRDDVRVIVATIAFGMGINK
PDVRLVVHFDLPRNIESYYQESGRAGRDGEPSRCTLFFNYGDIKTIEWSINQKTDQQEQL
IAKQQLRQMIDYAEGTDCRRTIQLGYFGERFAGNCGNCDNCRYPKPMQDWTIEAMKFLSC
VARCKERFGMLHIIDVLRGSKNQKITQNEHDKLSTYGIGKDRTVDEWRMLGRSLLHQGLL
EQTTDGYSVLKLNALSWEVMRRQRTVNLAVSAVQKVTWEETSEKAVEVELLMQRLRSLRK
QLADEQSVPPYVVFQDSTLKLMAQVQPTTLSEFAKLSGVGSHKLAQYGDKFLAEIRAYRQ
EQGVIDVVVNEKPAFGFRLPSTTELLTLQLHQRGLSVAEIAEKRNIRSSTVVGHLVDLIE
NNQPVDLNQLVPLEKQKKIWQVLEVLGDISLTPIREQLGENYTYDEIRLVRGRWRREKRK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagtatccaaatctcgaacaagcgctaaaatatcacttcggttacgaccgattc
cgtccgggacaacggcaaattatcgaggatgcgctgcaaaatcgggatttgatggtggtg
atgcctacgggtgggggtaagtctttgtgttttcagttaccagcgctgttaaagaagggt
ttgaccgtggtggtgtctcctttgatcgctttgatgcaagaccaggtggaggcgttacgg
aataataatattagcgctacgttcctgaatagtagtttgaatgcttataaagtgcgatcg
cgtgaggaagctatcctcagtggtaaggtgaaattactttatgtcgcaccggaacggctt
ttaagtgaaagatttctgccgtttttagatttagttaatcaccaagttggaatttctacc
tttgcaattgatgaggcgcattgtgtctcggaatggggacatgatttccgtccagaatat
cggcaattgcgatcgctacgccaacgttaccccaatattcctgctgtcgcccttaccgct
acagctaccgatcgcgttcgcagtgatatcatccaacaattagggttaaagcaaccgagt
atccacatcgccagttttaaccgtcaaaatctttattatgaaatccgttctaaatctaaa
tctgcttacgcagagttattagaattaattcgtgaaacccaaggttcagcaattatttat
tgtttaactcgtaaaaaagttgatgaactaacttttaaattgcaaaacgataaaatttct
gccataccttatcatgcgggattaactgacgacgaacgcaccaaaaatcaaacgcggttt
attcgcgatgatgtgcgggtaattgtcgccaccattgcgtttgggatgggaattaataag
ccggatgtgcgcttggtggttcactttgatttaccacgcaatatagaaagttactatcaa
gaatcaggtagggcgggtagggatggcgaaccttcacgctgtaccctgttctttaattat
ggtgatattaaaactattgaatggagtattaaccaaaaaaccgatcagcaagaacaattg
attgctaaacaacaattgcggcaaatgatagactatgccgaaggtacagattgcagacgc
acaattcaactaggttattttggcgaacgctttgcaggtaattgcggtaactgtgataat
tgccgttatcccaaacccatgcaagattggacgattgaagcgatgaagttcttatcttgc
gtagcacgttgtaaagaaagatttgggatgctgcatattattgatgtgctgcgaggctca
aaaaaccagaaaattacccaaaatgaacacgacaagctatctacctacggtatcggcaaa
gatagaactgtggatgaatggcggatgctggggcgatcgcttttacaccaaggtttactc
gaacaaaccaccgatggttactcagttttgaagctgaacgccttgagttgggaagtgatg
cggcgacaacgtaccgttaatttagctgtatcagccgtgcaaaaagttacttgggaagaa
actagcgaaaaagcggttgaggtagaactacttatgcagagattgcgatcgctaagaaaa
caactagctgatgaacaatctgtaccaccctacgttgtttttcaagattctaccttgaaa
ttaatggcacaggtgcaacccacaaccctcagcgaatttgccaaactttctggcgtaggt
agtcataaactcgcccaatacggtgataaattcctggcagaaattcgcgcctatcgtcaa
gaacaaggtgtaatagatgtagttgtgaatgaaaaaccagcttttggttttcgcttacct
tcaactacagaattattaacattacaattgcatcaacgcggtttgagtgtggctgaaatt
gccgagaaaagaaatattcgttctagtacagttgtaggacacctagtagatttaattgaa
aataatcagcctgtagacttaaatcaattggttcctttagaaaagcaaaaaaagatttgg
caagtcctagaagtcctaggtgatatttctctcaccccaattcgcgaacagctgggtgag
aattatacttatgatgaaattcgcttagtaaggggaagatggcggagggaaaaacggaag
taa
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