Tolypothrix sp. PCC 7910: HCG51_29335
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Entry
HCG51_29335 CDS
T06504
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
toq
Tolypothrix sp. PCC 7910
Pathway
toq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
toq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HCG51_29335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
toq03019
]
HCG51_29335
03400 DNA repair and recombination proteins [BR:
toq03400
]
HCG51_29335
Enzymes [BR:
toq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HCG51_29335
Messenger RNA biogenesis [BR:
toq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HCG51_29335
DNA repair and recombination proteins [BR:
toq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HCG51_29335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HTH_IclR
P-loop_SecA
HEM4
Cas3-like_C_2
DUF6575
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
QIR40388
LinkDB
All DBs
Position
complement(7324681..7326303)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKQRQNLHQIAQQTFGYDRLRPAQQEVIKAVLEGRDTLAVMPTGSGKSAIYQIAALLIP
GITIVISPLLALQRDQVEAIKEQNIARAAAVNSTISNSQRQEIFAELENQKIEFLFLSPE
QFNNQEVVEKLVNAKPSLFVIDEAHCISEWGHDFRPDYLRLGAVIAALGHPPVLALTATA
SPLVRDEIVERLEMREPQIFVRGFDRPNIWLGVETFHEEGEKLNALLKYLAAAEKPGIVY
AATRKHTEDLAAVLQERCIKANAYHAGMKAAEREKVQAAFMADELDVIVATCAFGMGVDK
SNVRFVYHYDISDSLDSYYQEIGRSGRDGEQAEAILFYCPNDLQIRRFFASGGKIDVDEV
LQVAEAVQQADEPLNLEDLQEATDLSRSKLTKAVSRLQEVEAVAILPTGEVTTSEVEVNQ
AASVQAATLAQQRRQQFMRSRLEMMRNYAELRDCRREFLLNYFGESVENKCGFCDNCQAG
ITVETDTFQPFPINSYVIHTSYGKGQVMRYEADKMVVLFEKFGYKTLAVELVQKLLKQVE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacagcgacaaaatcttcaccagattgctcaacaaacctttggctacgatcgc
ttacgtcctgcacaacaagaagtgataaaagcagttcttgagggacgagatactttagct
gtaatgcctactggttcagggaaatcggcaatttatcaaattgcagcgctattaattcct
ggtataacaatagttatttctcccttgctagcacttcagcgtgaccaagtagaagcaata
aaagaacaaaatatagcaagagcagctgcggttaactcgacgatttctaattctcaacgc
caagaaattttcgctgaactagaaaaccaaaaaatagaatttctgtttctctctccagag
caattcaacaatcaagaagtagtagaaaaattggttaatgccaaaccttctctatttgta
attgatgaagctcattgtattagtgagtggggacatgatttccgtcctgattacctacgg
ttgggtgctgtgattgcagcacttggtcatccacctgtattagcactaacagctacagct
tccccgttagtccgcgatgaaattgtcgaacgcttggagatgcgcgaaccacaaatattt
gtgcgtggctttgacagaccgaatatttggctgggtgttgagacattccatgaggaaggc
gaaaagctgaatgcattactcaagtatcttgcggctgcggaaaagccagggatagtttac
gccgccacccgcaagcatacagaagatttggcagcagttttacaggaaagatgtatcaaa
gctaacgcatatcatgcaggtatgaaggcagcagaaagagaaaaggtacaagctgctttt
atggcagatgaattagatgtgattgttgctacctgtgcttttggcatgggtgtagataaa
tcaaacgtgcgctttgtttatcactacgacatcagcgattctctcgactcctattatcag
gaaattggacgttctggtagagatggagagcaagcagaagcaattttgttctactgtcct
aatgatttgcagattcgccgcttttttgctagtggtggcaaaatagatgttgatgaagta
ttacaagtagccgaagctgtacagcaggctgatgagccactgaatttagaagatttacag
gaagcaacagatttatctcgcagcaaactgacaaaagctgtgagtcgtttgcaagaagta
gaagcggtggcaattttacccacaggtgaagtcaccaccagtgaagttgaagttaaccaa
gctgcttccgtacaagcagccaccctagcacaacaacgacgacaacaatttatgcgatcg
cgtctggaaatgatgcgaaactatgctgaactacgcgattgtcggcgtgagttcctgctc
aactattttggtgaatcagtagaaaataaatgtggcttttgtgacaattgccaagcggga
attactgttgagacagatacgtttcaaccttttcccattaatagctatgtaattcatact
agctatggtaaagggcaagtgatgcgctatgaagcagataaaatggtggttctgtttgaa
aaattcgggtacaaaactctcgcggttgaattagtccagaaattactcaagcaagttgaa
tag
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