Thalassolituus oleivorans R6-15: R615_01185
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Entry
R615_01185 CDS
T03056
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tor
Thalassolituus oleivorans R6-15
Pathway
tor00300
Lysine biosynthesis
tor00470
D-Amino acid metabolism
tor01100
Metabolic pathways
tor01110
Biosynthesis of secondary metabolites
tor01120
Microbial metabolism in diverse environments
tor01230
Biosynthesis of amino acids
Module
tor_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tor00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R615_01185 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R615_01185 (dapF)
Enzymes [BR:
tor01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
R615_01185 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
AHK14769
LinkDB
All DBs
Position
complement(244793..245623)
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AA seq
276 aa
AA seq
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MWLKFSKMHGLGNDFVVVDLVTQSGFIRPERVRELAHRNFGIGFDQLLIVEQPSRPDVDF
KYRIFNADGSEVENCGNGARCFARFVYDQHLTGKRTIRVETANGIIELNLTDDNQVVVDM
GKPILIPADIPFSANQFAPEYTIEVDGIGAVNIGAVSMGNPHAVLRVDDVDTAPVESWGP
LLESCPQFPRKVNVGFMQVVDEHNIRLRVFERGSGETLACGTGACAAVVSGQLRGWLKPG
VTVSLPGGELFIEWDGENSVNMTGPANTVFEGRVNV
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaagttcagcaaaatgcacggcttaggtaacgactttgtcgtcgtcgaccta
gtaactcagagcggttttattcgccctgagcgcgtgcgcgaactcgctcatcgcaacttc
ggcattggctttgatcaactgcttatcgttgagcaaccttcacgtcctgatgtcgacttt
aaataccgtattttcaatgccgatggcagtgaagttgaaaattgcggcaatggcgcacgt
tgctttgcgcgatttgtttatgatcagcacctaaccggtaagcgcaccattagagtcgaa
accgcaaacggcatcatagaattaaaccttaccgacgataatcaagtggttgttgatatg
gggaaacccattttaatacccgcagacattccgtttagcgctaaccaatttgcaccggaa
tacaccatcgaagtagacggcattggcgcagtcaatatcggtgcagtgtcgatgggcaat
cctcatgccgtgctacgcgtcgatgatgtcgataccgctcccgtagaaagctgggggcca
cttttagaaagctgcccacaatttccacgcaaagtgaacgttggctttatgcaggtggtt
gatgaacacaatattcgcttgcgggtatttgaacgcggttcgggtgaaaccttagcctgt
ggcaccggtgcctgcgccgctgtggtctcgggacaactacgcggctggttaaaacccggc
gtcaccgttagcttaccgggtggtgaattatttattgagtgggacggcgaaaactcagtg
aatatgactggaccagccaataccgtttttgaagggcgtgtaaacgtttaa
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