Thalassolituus oleivorans R6-15: R615_01190
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Entry
R615_01190 CDS
T03056
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tor
Thalassolituus oleivorans R6-15
Pathway
tor00300
Lysine biosynthesis
tor00470
D-Amino acid metabolism
tor01100
Metabolic pathways
tor01110
Biosynthesis of secondary metabolites
tor01120
Microbial metabolism in diverse environments
tor01230
Biosynthesis of amino acids
Module
tor_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tor00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R615_01190
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R615_01190
Enzymes [BR:
tor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
R615_01190
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHK14770
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All DBs
Position
complement(245645..246895)
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AA seq
416 aa
AA seq
DB search
MSVFNYKNGVLNAENVSLAALAEQHGTPLYVYSRAAFEQHFTAYTDALGEWPSLVCFAVK
SNSNIGVLSALARIGAGFDIVSEGELERVLAAGGEPSRIVFSGVGKQAREMQRALNVGVY
CFNVESEAELERLSEVASAMGKTASVSLRVNPDVDAQTHPYISTGLKDNKFGIDINDAAR
IYQKAASLPGIAIKGVDCHIGSQLTEISPFLDALDRVLELVDDLAAREIRIEHLDLGGGL
GVKYRDENPASPAEYIAAIKERLGDRTFKLIFEPGRSVSANAGVFLTRVEYLKLNDHKNF
AIIDGAMNDLIRPALYSAWQAIVPVNETSEEPVRAYDLVGPVCETGDFLGKNRDLAIKQG
DLLAVMSAGAYGFVMASNYNSRGRPAEIMVDGEQAYVVRERESIASLFSNESCLPK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtattcaattataaaaatggcgttttaaacgctgaaaatgtgtcactagccgca
ttagcagagcagcacggtacgccgttgtatgtctattctcgtgccgcttttgagcaacac
ttcaccgcttataccgatgccttaggcgaatggccaagtttggtctgcttcgcggtcaaa
tctaactctaacattggtgttctgagcgccttagcacgcataggagcaggcttcgatatc
gttagtgaaggcgaattagaacgcgtactggcggcaggtggcgaaccctctcgcatcgtc
ttctcaggtgttggtaagcaagcacgcgaaatgcagcgcgcccttaatgttggcgtgtac
tgtttcaacgttgaatcagaagctgaattagagcgtttaagtgaagtcgccagcgccatg
ggcaaaactgcctcggtttctctgcgcgtaaaccccgacgtcgatgcgcaaacgcatcca
tatatttctactggcttaaaagataataagttcggtattgatatcaatgacgccgcgcgt
atttatcaaaaagctgccagcttgccgggcattgccatcaaaggtgtcgactgtcatatc
ggtagccagctaaccgaaatttcgccatttttagatgcactcgatcgagtgttagaactg
gttgacgacttagcagcgcgggaaattcgcattgaacatctcgacctaggcggtggcctc
ggcgttaagtatcgcgatgagaaccctgcctcgcctgccgaatacattgcagccattaaa
gaacgtctaggtgatcgtacctttaaactcatcttcgaaccgggtcgctcagtatccgcc
aacgccggtgtgtttttgacccgcgttgaatatttaaagctgaacgatcataagaatttc
gccattatcgacggtgcgatgaacgacttgattcgccctgcgctatacagcgcgtggcaa
gcgattgtgcccgtaaatgaaacctcagaagagcctgtacgcgcgtacgaccttgttggt
ccagtgtgtgaaactggggacttcttaggtaagaatcgtgatcttgcgatcaaacaaggc
gatctattagcggtgatgtccgctggcgcatacggctttgtaatggcatccaactacaac
agtcgtggtcgccctgcagaaataatggtcgatggtgaacaagcctatgttgtgcgcgag
cgcgaaagtattgcatccttgtttagcaacgaatcctgcttgccaaaataa
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