Thalassolituus oleivorans R6-15: R615_05060
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Entry
R615_05060 CDS
T03056
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tor
Thalassolituus oleivorans R6-15
Pathway
tor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R615_05060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tor03400
]
R615_05060
Enzymes [BR:
tor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
R615_05060
DNA repair and recombination proteins [BR:
tor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R615_05060
Prokaryotic type
R615_05060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHK15310
LinkDB
All DBs
Position
1094458..1095198
Genome browser
AA seq
246 aa
AA seq
DB search
MFADNIRSYDLFIYPGMPAMPIFQQSPLDPSWQRVLGAEFDKPYMQNLAAFLAAERAAGK
VIFPPEPLVFNAFNHTPFEQVRVVIIGQDPYHGEGQAHGLSFSVPEGIKPPPSLVNIFKE
IESDLGVAMSGLGDLTPWANQGVLLLNAMLTVEQANAGSHQKKGWEAFTDAAIAALNAER
EGLVFLLWGGYAQKKCKAIDQTKHLVLQSAHPSPLSVYRGFYGSQPFSQINQYLTARGQT
PIQWQF
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcggataatatccgctcctacgatctctttatttatcctgggatgcctgccatg
cctattttccaacagagccctctcgatccatcttggcaacgtgttttaggcgcagaattc
gataaaccctacatgcaaaacctagcggcgtttttggcggctgaaagagctgccggcaag
gtgatttttccgcctgagcctttggtctttaatgcatttaatcacacaccatttgagcag
gtgagggtggtgattattggccaagatccttatcacggtgaaggccaagcacatggtttg
agtttttcggttcctgagggaataaagccaccaccatcgctggtcaatatctttaaagaa
atcgagagcgatcttggtgttgctatgtctggtcttggtgatttaacgccgtgggccaat
caaggtgtattgctgctgaacgccatgttaaccgtagagcaagcaaatgccggctcacat
caaaagaaaggctgggaggcctttacagacgctgctatcgccgcactgaatgccgagcgc
gagggtttggtgtttttactttggggcggttacgcgcagaagaagtgcaaagcgattgat
cagaccaagcacttagtattgcaatcggcacatccatcgcccttgtctgtgtatcgtgga
ttttacggcagccaacctttctcgcaaattaatcagtatctgaccgctcgcggccagaca
ccgattcaatggcaattttga
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