Thalassolituus oleivorans R6-15: R615_06420
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Entry
R615_06420 CDS
T03056
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tor
Thalassolituus oleivorans R6-15
Pathway
tor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R615_06420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tor03400
]
R615_06420
DNA repair and recombination proteins [BR:
tor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R615_06420
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
R615_06420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
Kinesin
HEM4
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AHK15525
LinkDB
All DBs
Position
1374298..1376334
Genome browser
AA seq
678 aa
AA seq
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MSKAFELKSKYSPAGDQPNAIKQLVGGINAGLLKQTLLGVTGSGKTFTMANVIAECQRPA
IIMAHNKTLAAQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIDKDASVNEHIE
QMRLSATKALLERRDAIIVATVSAIYGLGDPDSYLKMMLHMVRGDRVDQRTILRRLAELQ
YSRNDMDFHRGTYRVRGEVIDVFPAESDDEAIRIELFDDEVEQLSTFDPLTGAIRNRLAR
ATIYPKTHYVTPRQKILDAIDGIKVELDERLDYYRKENLLVEAQRLEQRTRYDIEMMQEL
GYCSGIENYSRYLSGREEGAPPPTLFDYIPKDALVFVDESHVTIPQIGGMYRGDRSRKET
LVQFGFRLPSALDNRPMRFEEWEAIVPQCIFVSATPGNYEKEHQDNVVEQVVRPTGLIDP
VIEIRPATGQVDDVLHELNERTAKGERILITVLTKRMAEDLTDFLQEQNVRVRYLHSDID
TVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAIFDADKEGFLRSERSLIQTIGR
AARNLNGKAILYADRITDSMQKAIDETDRRREKQVEFNTKHGITPKGVMKSVEDILEATP
APGKKTHNRNGRSKQKVAENAADYNANDWQHLPAHKLGARVSEVEDQMFKAAKDLNFEEA
ARLRDLLHRMKEQMIANS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggcatttgagctgaaatccaaatattctcccgctggtgatcaaccaaacgcc
atcaaacagttggtagggggcataaacgcaggtctgttaaaacagacattgctaggggtc
acgggctccggcaagacatttaccatggcgaatgttattgctgagtgccaacggccagcc
attatcatggcgcacaataaaacattggcggcacagctgtatggcgaatttaaagaattc
ttccccaataacgcggttgagtacttcgtttcttattacgactactaccagcctgaagcc
tatgtgccgtcgtcagatacctttattgataaagacgcctcagtaaacgaacacatagaa
cagatgcgtttatcggccaccaaagccttattggaacggcgcgacgccattatcgtggct
accgtgtccgcaatttacggtttgggtgatcctgactcgtatttgaaaatgatgctgcac
atggtgcgtggtgatcgtgttgatcaacgtacgatcttacgtcgtttggcagaactgcaa
tacagtcgcaacgatatggatttccatcgaggcacctaccgagtacgtggtgaagtgatt
gatgtattcccagcggaaagcgacgacgaagccatacgcattgaattattcgacgacgaa
gtagagcagctcagcaccttcgatcctctaacgggtgctatacgcaatcgtttagctcgt
gccacgatataccctaaaactcactatgtaacaccgcgtcagaaaattctcgacgccatc
gacggcattaaagttgaactggatgagcgcctagattactaccgcaaagaaaatctatta
gtcgaggctcagcgtttagaacagcgcacccgttacgacatcgaaatgatgcaagagctg
ggttactgctcgggtattgaaaactactcgcgttacttgtcaggtcgcgaagagggcgca
ccgccgccgaccttatttgattacattcccaaagacgcgcttgtctttgtcgacgaatcg
cacgtgaccattccacaaattggcggcatgtatcgcggtgaccgctcgcgtaaagaaacc
cttgtacaatttggtttccgcttgccgtcagccttagataaccgcccgatgcgctttgaa
gaatgggaagcgattgtgccgcagtgcatttttgtttctgcaacgcctggtaactacgaa
aaagaacaccaagataacgtcgttgaacaggtcgttcgcccaaccggcttgattgatcct
gtgattgaaattcgtccagcgacaggtcaggttgacgacgtactgcatgagctaaatgag
cgtaccgccaaaggcgaacgtattctcattactgtactaaccaaacgcatggcggaagac
ctcaccgacttcttgcaagaacaaaacgtgcgtgtgcgctatttgcactccgatattgat
accgtcgaacgtgtggaaattattcgtgatttgcgcctcggcgaatttgatgtgttggtg
ggtattaacctattgcgagaaggtttggatattcccgaagtctctttagttgctattttc
gatgctgataaagaaggcttcttgcgttctgagcgctccttaattcagaccattggtcgt
gccgcccgtaaccttaacggtaaagcgattttatacgcggatcgtattaccgactcgatg
caaaaagccattgacgaaaccgatcgccgtcgtgaaaaacaagtggaattcaacaccaaa
cacggcatcacaccaaaaggcgtcatgaagtcagtggaagatattcttgaagctacgcca
gcaccgggtaaaaagacccataaccgcaatggtcgcagtaaacagaaagtggccgaaaac
gcagccgactacaatgcaaatgactggcaacatttaccagctcacaagctcggcgcacga
gtgagtgaagtggaagatcaaatgtttaaagctgcaaaagaccttaattttgaagaggct
gcgcgcttgcgagatctgctgcaccgtatgaaagagcaaatgattgcgaacagctaa
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