Thalassolituus oleivorans R6-15: R615_08405
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Entry
R615_08405 CDS
T03056
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tor
Thalassolituus oleivorans R6-15
Pathway
tor03030
DNA replication
tor03430
Mismatch repair
tor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R615_08405
03430 Mismatch repair
R615_08405
03440 Homologous recombination
R615_08405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tor03032
]
R615_08405
03400 DNA repair and recombination proteins [BR:
tor03400
]
R615_08405
Enzymes [BR:
tor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R615_08405
DNA replication proteins [BR:
tor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R615_08405
DNA repair and recombination proteins [BR:
tor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R615_08405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AHK15789
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All DBs
Position
1788109..1788813
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AA seq
234 aa
AA seq
DB search
MRQVVLDTETTGIGEGHRIIEIGCVEVIERKLTGRHFHVYINPDRAIDAEAVEVHGITNE
WLIETGAPLFGQVADDFCDFISGAELVIHNAAFDVGMMDAEFKRLNMPLTRTFCGVLDTL
LMARDLHPGARNSLDALCKRYGIDNSHRELHGALLDAEILADVYLMMTGGQTDLALAVEE
QQEQQEVVIDISDIDLSTTELAVIRASADELKAHDQMLDLLDKKSENGAIWRRV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtgagacaagtcgtactagatactgaaaccacaggtattggtgaagggcatcgaattatt
gaaatcggctgcgttgaagtaatagaacgcaaattgaccggtcgccattttcatgtctac
atcaaccctgatcgagccattgatgccgaagctgtcgaagttcacgggattactaatgaa
tggttaattgaaacaggtgcccctttatttgggcaagtagccgacgatttttgtgatttt
atttcgggtgctgaactagtaatacataacgcagcgttcgacgttggcatgatggacgca
gaatttaagcgtttgaatatgcccttaactcgtaccttctgcggtgtacttgataccttg
ctgatggcgcgtgatttacatccgggtgcgcgtaatagcttagatgccctgtgtaaacgt
tatggtattgataatagtcatcgtgagcttcacggggcattgctggatgcagagattctc
gccgatgtgtatctaatgatgacgggtggccaaacggatctggcgttggcggtagaagag
caacaagagcagcaagaggttgttattgatataagtgacattgatttatcaacaaccgaa
cttgctgtgattcgagcgtcggcagacgagcttaaagcccatgaccaaatgttagattta
ctcgataagaaaagcgaaaacggcgccatttggcgccgtgtttaa
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