Thalassolituus oleivorans R6-15: R615_09700
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Entry
R615_09700 CDS
T03056
Name
(GenBank) RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
tor
Thalassolituus oleivorans R6-15
Pathway
tor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R615_09700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tor03019
]
R615_09700
Enzymes [BR:
tor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R615_09700
Messenger RNA biogenesis [BR:
tor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R615_09700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
UvrA_inter
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AHK15994
LinkDB
All DBs
Position
complement(2056134..2057549)
Genome browser
AA seq
471 aa
AA seq
DB search
MLKKLLKAVSGKSKAPTNTPPKQQSKSTADTKKPAVAKTSTANKGSKPANTTAKTNGPQH
AAGREKHEHKRTKANAVVEAPWDISQFKVEPEEGKTRFHDLDLPDSVMQGIHKLGFTYCT
PIQAESLPAALRGRDTIGQAQTGTGKSAAFLLTILNRLLTNVPAERFASEPRALVIAPTR
ELVMQIGKDAEGLAKYTGLNVLTVVGGMDYEQQRKVLRDEVVDILVATPGRLIDFMRSQD
VFLDQIEVLVLDEADRMLDMGFIPDVRRIVRSTPPKDERQTLLYSATFNYDVRILIDQWT
KDPHQVVIEPEQVTTDRVVQKCYLVAESDKYRVLEQVLNEEKPERCIIFANRRDLTRNLC
DKLNKHGHVSVLLSGEVAQQKRVRTLERFRDGHVNILVATDVAGRGIHVDGVSHVINYTL
PEDPEDYVHRIGRTGRAGAMGVSISLVSEDDAFVLPDLEKYLGMKLELTQP
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaaaaaactgttaaaagcagtttcgggaaagagtaaggcgccgaccaatacgcca
ccgaagcagcaatccaaaagcacggcagatactaaaaagccagccgtcgcgaagacatcc
actgccaataagggcagtaagccggctaacactacggcaaagacaaatggtccgcagcac
gctgcgggtcgcgaaaagcacgaacataagcgcactaaagcaaatgcggttgtcgaagcg
ccgtgggatatcagccaatttaaggttgaacctgaagaaggcaaaacgcgtttccacgac
ttagaccttccagattctgtgatgcagggcattcataaactcggcttcacttattgcacg
cctattcaggccgagagtttaccagcagcgttgcgcggtcgggataccattggccaagca
caaacgggcacgggtaagtcggcagcgtttttgttaaccattttaaatcgcttgctcact
aatgtaccggcagagcgttttgccagtgaaccccgtgctttggtaattgcgccaacgcgt
gagctagtgatgcaaattggcaaagacgctgaaggtctggccaagtataccggcttgaat
gttctgaccgtcgttggcggtatggattacgagcagcaacgtaaggttttacgtgatgaa
gtcgtcgatattctggtggctacaccgggacgtttgattgactttatgcgcagccaagat
gtgttcctcgatcaaattgaagtattggtgctagacgaagccgatcgcatgttagatatg
ggctttatccccgatgttcgtcgcatcgtgcgttcaacgccgcccaaagatgagcgtcaa
acgctgctgtattcagcaacgttcaactacgatgttcgtattttgatcgaccagtggacc
aaagatccgcatcaggtcgtgattgagcctgagcaagtaacgacagatcgcgtcgtgcag
aagtgctacttagtggcagagtctgataagtaccgtgtgcttgagcaggtgctaaacgaa
gagaaaccagaacgttgcattatcttcgctaaccgtcgtgatttaactcgtaatctctgc
gacaaactaaataagcacggtcatgtgtctgtgttgttgtctggtgaagttgcgcagcaa
aaacgcgtgcgcacgctggaacgcttccgcgacgggcatgtgaatattttagtggcaacc
gatgttgctggtcgtggtattcacgttgatggcgttagccatgtgattaactacaccttg
cctgaagatcctgaagattatgttcaccgtattggtcgtactggccgtgcaggtgctatg
ggggtatctattagcctagtatctgaagacgatgcatttgtgttgcctgatctagaaaaa
tatttaggcatgaagctcgaacttactcagccatag
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