Thalassolituus oleivorans R6-15: R615_11170
Help
Entry
R615_11170 CDS
T03056
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
tor
Thalassolituus oleivorans R6-15
Pathway
tor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
R615_11170 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tor03400
]
R615_11170 (xseA)
Enzymes [BR:
tor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
R615_11170 (xseA)
DNA repair and recombination proteins [BR:
tor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
R615_11170 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DHQ_synthase
Motif
Other DBs
NCBI-ProteinID:
AHK16214
LinkDB
All DBs
Position
2384635..2386011
Genome browser
AA seq
458 aa
AA seq
DB search
MSFQEPQTRDPGVFTVSQLNQRARQLLEISFSSVRVEGEISNLARPSSGHWYFTLKDSGA
QIRCAMFRSRTSQLKFLPKEGDHVELRGNVSLYENRGDYQLIVDSMKPAGEGALLLAFQQ
LKNRLAAEGLFDPARKRPLPVIKRIGLVTSPTGAAVHDMLTVLKRRWPAMEVDIYPTPVQ
GREATQQIVDAIGRANRDNRVDAIIVGRGGGSLEDLWCFNEEIVARAIAASQLPVISAVG
HEVDITIADFAADVRAPTPSAAAELVSPDQQDVIQRLQQMQRRLAQSMRQHLQRQQQRIL
RLQQRVRGPQHQLRNQAQRIDQLEVRLQRAMRQRLRDQQQRLGRLQQALNHQHPQRNLTE
YQQRLQRLWLQLQRRMQTNLQQQGQRLQSQAKLLSSLSPLEVLGRGYSITQRADGQVIEK
HTDVKIDDIMHTRLGSGWIESQVLSRRKTLKKSPPTKK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttcaagagcctcaaacccgagatccgggtgtattcaccgttagccaactcaat
cagcgtgcacgccaactgcttgagatttctttttcgtctgttcgggtcgagggtgaaata
tccaatttagctcgcccatcttcaggccattggtactttaccctcaaagacagcggcgct
cagattcgttgtgctatgtttcgttcgcggacctctcaactaaagtttttaccaaaagaa
ggtgatcacgttgagctacgcggcaatgtcagcctttatgaaaatcgtggcgattatcag
ctaattgtcgatagcatgaaacccgccggagaaggggctctgctgttggcatttcagcag
cttaaaaatcgcttagccgcagaaggattatttgaccctgcacgcaaacgaccgctgccc
gttattaagcgcattggtttagtcacctccccgactggggcagcagtccacgatatgctc
acggtattgaaacgccgctggccagcaatggaagtcgatatctaccctacgcctgttcaa
ggccgcgaagcgacacaacaaattgttgatgcgattggccgcgccaatcgtgataaccgc
gtagacgccatcattgttggccgtggcggtggttcactagaggatttatggtgctttaac
gaagaaatcgttgctcgtgccatcgccgcgtcacaattgccggtcattagtgcagtgggt
catgaagtcgatatcaccattgccgatttcgctgccgatgttcgtgctcctacgccatcg
gctgcagcagagcttgtcagcccagatcagcaagatgtcattcaacgcttgcaacaaatg
cagcgccgcttagcccagtcaatgcgccaacatttgcagcgacagcaacagcggattttg
cgcttgcagcagcgcgtgcgaggcccccaacatcaactacgtaatcaggctcaacgtatt
gatcagttagaagtacgcctgcaacgcgccatgcgtcagcggttacgcgaccaacaacag
cgtttaggccgattgcagcaagcgctgaatcaccaacacccgcaacgcaacctaactgaa
taccagcaacgcttgcagcgtttatggctgcaactacaacgacgcatgcaaactaatttg
caacagcaaggtcaacgtttgcaaagccaagctaagttactcagtagcctgagcccctta
gaagtattaggccgtggttattcgatcactcaaagagctgacggccaagtgattgaaaaa
cacacagatgtgaaaatagacgacataatgcacactagactcggctcaggctggattgaa
agccaagtattatcacgtcgtaaaacgttaaaaaaatcgccaccaacaaagaagtaa
DBGET
integrated database retrieval system
