Thalassolituus oleivorans R6-15: R615_11200
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Entry
R615_11200 CDS
T03056
Name
(GenBank) RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
tor
Thalassolituus oleivorans R6-15
Brite
KEGG Orthology (KO) [BR:
tor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tor03009
]
R615_11200
Enzymes [BR:
tor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
R615_11200
Ribosome biogenesis [BR:
tor03009
]
Prokaryotic type
rRNA helicases
R615_11200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHK16219
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All DBs
Position
2389986..2391365
Genome browser
AA seq
459 aa
AA seq
DB search
MTASTFASLGLPQEQLDNLQQMGYEQMTEIQQQALPAALEGKDVLAQARTGSGKTAAFGI
ALLSRINPRFFGAQTLIMCPTRELATQVATEIRKLARFQQNIKVVTLCGGMPIGPQIGSL
EHGAHIVVGTPGRIKDHLRKQTLDISQINTLVLDEADRMLDMGFAADIDSIVQETPHNRQ
TLLFSATYPENIEALSRQYQNNPVSIRVESLHTAHTIQQQFIECDRDDRLGALERALAHF
GIQQAVIFCNTKQTTHEVCTHLRDLGYSALGLHGDLEQKDRDRVLVRFRQGSLAILVATD
VAARGLDVDDLPAVINYELPRDAEVYVHRIGRTGRAGKEGLALSLTTNKEGYKRDAIAEQ
IGQKVNSMNADDLSTVPADIERPEWITLALAAGRRHKMRPGDVLGALTKNGGITGAEVGK
IDVLEQVTYVAVKRNACNAALQHLENTPIKGKNVRSRKA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatcaacattcgctagcttgggattacctcaagaacaactcgataacctgcaa
caaatgggttacgagcaaatgaccgaaatccagcagcaggcgttacccgccgcactggaa
ggcaaagatgtgctcgcccaagcacgtaccggtagtggtaaaaccgctgcctttggtatt
gccttgctaagccgcattaatcctcgcttctttggcgcgcaaaccttgatcatgtgccct
acccgcgaactggcgactcaggtagcgactgagattcgtaagctagcgcgttttcaacag
aatattaaagtggtcaccttgtgtggtggtatgccaattggcccacaaatcggctcgcta
gaacatggcgcgcacattgttgttggcaccccaggtcgaattaaagatcacctgcgcaag
caaactctggatatcagccaaatcaacacactagtactagacgaagcagaccgaatgctg
gatatgggctttgcagccgatatcgatagtatcgtgcaagaaacaccgcacaatcgccaa
acgttactgttctctgcaacttatcctgaaaacatcgaagcactgagccgtcagtaccaa
aataatccggtcagtattcgcgttgaatccttgcatactgcgcacaccattcagcagcaa
tttattgaatgcgaccgcgatgatcgcttaggcgcgctagaacgtgcgcttgcgcatttt
ggcatccaacaagcagtgattttttgcaataccaaacaaaccactcacgaggtttgtacg
cacctacgggatttaggttacagcgcgttgggtctgcacggtgatttagaacaaaaagat
cgtgaccgtgtactcgtgcgctttcgccaaggcagccttgcgattttggtggctaccgac
gtcgctgcacgtggcctcgacgttgacgacctgcctgctgtcatcaattacgaactccca
cgcgacgctgaagtctatgtgcatcgtattggtcgtactggccgtgccggtaaggaagga
cttgctctcagcctaaccaccaataaagaaggctataaacgcgacgccattgccgagcaa
atagggcaaaaagtaaacagcatgaacgccgatgatttaagcacagtacctgcagatatt
gagcgaccagagtggatcactctcgcacttgcagccggtcgtcgccacaaaatgcgcccg
ggggacgtactcggcgctctcacaaaaaatggtggtataacgggtgccgaagttggcaag
atcgatgtattagaacaagtcacttacgtggctgttaaacgcaacgcctgcaatgcagcg
ctacagcacttagaaaatacgcccattaaaggcaaaaatgtaagatcacgcaaagcttaa
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