Thalassolituus oleivorans R6-15: R615_13825
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Entry
R615_13825 CDS
T03056
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
tor
Thalassolituus oleivorans R6-15
Pathway
tor00071
Fatty acid degradation
tor00280
Valine, leucine and isoleucine degradation
tor00310
Lysine degradation
tor00362
Benzoate degradation
tor00380
Tryptophan metabolism
tor00410
beta-Alanine metabolism
tor00640
Propanoate metabolism
tor00650
Butanoate metabolism
tor00907
Pinene, camphor and geraniol degradation
tor00930
Caprolactam degradation
tor01100
Metabolic pathways
tor01110
Biosynthesis of secondary metabolites
tor01120
Microbial metabolism in diverse environments
tor01200
Carbon metabolism
tor01212
Fatty acid metabolism
Module
tor_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
tor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
R615_13825
00650 Butanoate metabolism
R615_13825
09103 Lipid metabolism
00071 Fatty acid degradation
R615_13825
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
R615_13825
00310 Lysine degradation
R615_13825
00380 Tryptophan metabolism
R615_13825
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
R615_13825
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
R615_13825
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
R615_13825
00930 Caprolactam degradation
R615_13825
Enzymes [BR:
tor01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
R615_13825
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
R615_13825
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
R615_13825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
DAO
NAD_binding_2
2-Hacid_dh_C
RS_preATP-grasp-like
F420_oxidored
NAD_binding_8
LSDAT_euk
Motif
Other DBs
NCBI-ProteinID:
AHK16597
LinkDB
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Position
complement(2976854..2978989)
Genome browser
AA seq
711 aa
AA seq
DB search
MFTHEIDDQGIVVLTWNDQSAPVNSLAQAAVAGFAEVLESLLVNDAVKGIVLTSGKSDFI
VGANLHEIQTMPQDPATIMGFIRKLHVLMRRMETAGKPVVAALNGTALGGGMEIALACHQ
RIAADNSKARFGFPEVNLGLLPGGGGTQRLARLLGIQAAMPWLLQATQAKPAEALAAGLI
HAVVPADQLISAAKEWALNNPKAIQPWDDKKFRLPGGEVQSAKAAQAFMGAEAMLRKKTQ
GNYLAPQAILQTLFEGCQLPIDAALEIEAKYFTELLLSDQAKAMIRTFFVALQDANKLKN
RPKDVEKKQFKKVGILGAGMMGAGIAYSSTLSGMDVVLLDTKQEAADRGKAYSEGILKKR
VTRGKMTQEKADAQLGRILATTDFNDLAGCDLVIEAVFEDRTIKADVTAKAEAVIGSDAI
FASNTSTLPITGLAQASQRPEQFIGLHFFSPVDKMPLVEIIMGEQTSQHTLAWALDYVQQ
LRKTPIVVNDSRGFYTSRVFSTYVMEGMALLKEGVAPALIENAGKKAGMPVGPLALSDEV
TLELMNRIGTQTRKDLGDAYVAHPADEVVKYMVEEADRIGKRTGKGFYDYPATDDKTAKK
MLWSGLAERFPLAVTQPDADYVVKRLLHVQAVETLRCVSEGVITRAHEVDIGSIFGWGFA
PHTGGTISYVETIIGMDRFIAEANELADAVGERYRVPANVIEKAAAGSSFY
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtttactcatgagatcgacgatcaaggtatcgtggttttaacatggaatgatcaaagc
gcgccggtgaattcattggcgcaagcggctgtggctggctttgctgaagtgctggaaagc
ttgttggttaacgatgcggtaaaaggcattgttctgacatctggcaagagcgattttatt
gttggggccaacctgcatgaaattcaaaccatgccacaagatccagcaacgattatgggc
tttatccgtaaattgcatgtgttaatgcgccgcatggaaacggctggtaagccggttgta
gctgctttaaatggcacagcactgggcggtggtatggaaatcgcgctggcctgccatcaa
cgtatcgcagcagataacagcaaagcgcgtttcggttttcccgaagtgaatttgggttta
ctgccggggggcggtggtacacaacgcttagcgcgtttattaggtattcaagcagcgatg
ccgtggttgttacaagccacgcaagctaagcctgctgaagccttagctgccggtttgatt
catgccgttgttcctgcagatcagctgatcagtgcagcgaaagaatgggcattaaataac
cctaaagcgatacagccttgggatgataaaaaattccgcttacccggtggtgaagtgcaa
tcggctaaagccgcacaagcatttatgggtgcggaggcaatgttgcgtaaaaagactcaa
ggtaattaccttgcgccacaggcgattctgcaaaccttatttgaaggttgccaattgccg
attgatgcggctttagaaattgaagcgaaatacttcactgaattgctattaagcgatcag
gcgaaagctatgattcgtactttctttgttgcattacaagatgccaataaactgaaaaat
cgtccaaaagacgttgagaaaaagcagtttaagaaagtcggtattttaggcgctggcatg
atgggcgccggtattgcttactcatcaacgctgagtggtatggatgtggtattgcttgat
actaagcaagaagcagctgatcgcgggaaagcttattctgaaggcattttaaagaagcgt
gtaacacgaggaaaaatgacccaagaaaaggcggatgcacaactaggccgaattctcgca
accacggattttaatgatcttgccggttgcgacttagtgattgaagccgtgtttgaagat
cgtacgattaaggccgatgtcacggctaaggcagaagctgttattggtagcgatgccatt
ttcgcctcaaatacctcgaccttgccgattactggtttagcgcaagcgagtcagcgacct
gagcaatttattggcctacatttcttctcgccggtggataaaatgccgttggtcgaaatt
attatgggcgagcaaacatcgcagcatactttagcttgggcattggattacgtgcagcaa
ttgcgtaaaaccccaatcgttgtaaacgatagtcgtggcttttatacctcacgagtcttc
agtacctatgtgatggaaggcatggcgttattgaaagaaggggttgccccagcattgatt
gaaaatgcgggtaaaaaagctggtatgccggttggcccattagcgctaagcgacgaagtc
actttagagttaatgaaccgcattggtactcaaacgcgcaaagatttgggcgatgcctat
gttgctcatcctgccgatgaagtcgttaaatatatggtcgaagaggctgaccgtattggt
aaacggacaggtaaaggcttttatgattatccggctaccgatgataaaacagcgaaaaaa
atgctgtggagcggtttagcagagcgattccctctggcggttacacagcctgatgcggat
tatgtggtaaagcgtttactgcatgttcaagccgtagaaactttacgttgtgtctctgag
ggtgtgattactcgtgcccatgaagttgatatcggttctatttttggttggggatttgcc
cctcatactggcggtacgatttcatacgtagaaacaatcattggtatggatcgctttatt
gccgaagcgaatgagttagcggatgccgttggcgaacgttatcgcgtacctgctaatgtg
attgagaaagcggcagcaggttcgtcgttctattga
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