KEGG   Thalassolituus oleivorans R6-15: R615_14775
Entry
R615_14775        CDS       T03056                                 
Symbol
ribD
Name
(GenBank) diaminohydroxyphosphoribosylaminopyrimidine deaminase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
tor  Thalassolituus oleivorans R6-15
Pathway
tor00740  Riboflavin metabolism
tor01100  Metabolic pathways
tor01110  Biosynthesis of secondary metabolites
tor01240  Biosynthesis of cofactors
tor02024  Quorum sensing
Module
tor_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:tor00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    R615_14775 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    R615_14775 (ribD)
Enzymes [BR:tor01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     R615_14775 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     R615_14775 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AHK16727
LinkDB
Position
3186324..3187448
AA seq 374 aa
MNHEYYMARALQLAKLGLYSTSPNPRVGCVIVREGVIVGEGWHKKAGGPHAEVHALQDAG
DMAKGATAYVTLEPCAHTGRTAPCAQGLIEAGIAEVIGATRDPNPLVSGRGYDMLRDADI
EVTEHCLQAEAEALNAGFMKRMRTGLPWVRVKLAQSLDGRTAMASGESQWITGPAARRDV
QRLRARSCAVITGADSILLDNPAMTVRPEETGIELEEHLWRQPLRVVIDGRNRIGGDAKL
FAQKGDVLIATRKISADPITRDEKLGKLAYWSGESKGKVDLYALLQELGERGCNEVLVES
GAALAGAFVAAGLVDELILYCAPTLLGSNARPLLSLPLDSMKEQIRWHWQDSRQVGDDLR
LTLRPVKLPVAKEA
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgaatcatgaatactatatggcccgagcgctacagctggccaaactcggtttatacagc
actagccccaaccccagagttggctgcgtcatcgtgcgtgaaggcgttattgttggcgaa
ggctggcacaaaaaagccggtggtccccatgccgaagtacacgccctacaagatgccggt
gatatggctaaaggcgctaccgcttacgttaccttagagccttgcgcgcacacaggacgc
acagccccatgcgcacaaggcctcattgaggccggcattgccgaagtcatcggcgctaca
cgcgaccccaacccattagtatctggtcgtggttacgacatgctgcgtgatgcggatatc
gaggttaccgaacactgtttgcaagccgaagccgaggcactcaatgccggttttatgaag
cgcatgcgtaccggcctaccttgggttcgcgtcaaattagcgcaaagcctagatggtcgt
accgcaatggcatccggtgaaagccaatggattaccggccctgcagcacgtcgtgacgta
caacgcttacgtgcacgcagctgcgcagttatcacaggtgcagacagcattctgctggat
aacccagcgatgacagtgcgcccagaagaaacagggatagaactcgaagagcacctatgg
cgtcagccattgcgcgttgtcatcgacgggcgcaatcgtattggtggcgatgctaaatta
tttgcccagaaaggtgatgtattaattgccactcgcaagattagcgccgatcccattacc
cgcgacgaaaagttaggaaaactggcttactggagcggagagagtaaaggcaaagtcgat
ctttacgctctcttacaggaacttggcgagcgcggatgcaacgaagtattagttgaatct
ggcgctgcacttgcgggggcatttgtcgctgccggattagtcgatgagctgattttatat
tgtgcccccaccctattggggagcaatgctcggccgctgctatccttaccgttggatagc
atgaaagaacaaatacgctggcattggcaggactcgcgccaagtaggagatgatttacgt
ctcaccttgcgccccgtcaaactcccagtagcaaaagaagcgtaa

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