Thalassolituus oleivorans R6-15: R615_15105
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Entry
R615_15105 CDS
T03056
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tor
Thalassolituus oleivorans R6-15
Pathway
tor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
R615_15105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tor03400
]
R615_15105
Enzymes [BR:
tor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R615_15105
DNA repair and recombination proteins [BR:
tor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R615_15105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_30
HypA
TrwB_AAD_bind
AAA_19
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHK16777
LinkDB
All DBs
Position
3252830..3255037
Genome browser
AA seq
735 aa
AA seq
DB search
MSFFVVEIALPVPLHRTFDYLPVQNDTQEHYLPGQRVRAEFGRQLLTGIVVGCKNHTEVP
QNKLRALLERCDDAPLINEHSLTLCRWLADYYHHSLGEVLEHMLPVMLRRGCSLSEANER
IWRRIASVDTNPKLRGEKQIALWKKFQHSECWVHANMTAAGFALAQLKRLAELELIVEEE
ALPLPNIPAVDPVFHTLNAEQQAALHAIEPYLGRFKACLLEGVTGSGKTEVYLRLINQVL
SKGQQALVLVPEIGLTPQTVQRFQERFNVPVALLHSGLNDRERLQGWRQVSEGKARILIG
TRSAVFTPMPELGLIILDEEHDGSFKQQDGLRYSARDFALVRAHQSQVPIVLGSATPSLE
TLHNALTGRYLHLKLTQRAGKAKPPQMKLHSILHQPLTAGFAQPVLAAMQKHLENNKQVL
VFINRRGFAPLLACRDCGWMAECRRCDARLTLHQYPPHLHCHHCDFQQGIPAHCPQCQSH
KVEAVGQGTERIEEQLAQLFPQRPIRRVDRDTVRNKQAFDELFNEIHTGGSCILVGTQML
AKGHHFPDVTLVVILDSDAGLFSADFRGMEHSAQLIEQVSGRAGRADSPGQVWIQTLYAD
HPQLNLLIDSGYHALALSMLQERQLQQLPPYTHMALLRSECEDRIQTQQLLQQARAFIQD
WLRQHAHDNAPVTLLGPFPAIMERRAGRFRYQLQLFCPGRVPLHQTLEALVQYLQQLKGF
GKVRWNLDVDPLDTI
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttttgtagttgagatcgctctccccgtcccattgcaccgcacgttcgattat
ttaccggtgcaaaacgacacgcaagaacactaccttccgggccaacgtgtgcgcgccgaa
ttcggccgacagttgcttactggcatcgttgttggttgcaaaaaccacacggaagttccg
cagaataaattacgagccctgctcgaacgttgtgatgacgcccccttaatcaatgagcac
agcttgactttgtgtcgctggttagccgattactaccatcacagcttaggcgaagtgcta
gagcacatgctaccggtgatgttacgccgtggctgctcactcagcgaagccaatgagcgt
atttggcgtcgcatcgccagtgtcgacacgaatcccaaactgcgcggcgaaaagcaaatt
gccttgtggaaaaaatttcagcacagcgaatgctgggttcatgccaatatgacggcagca
ggctttgcccttgcacaacttaagcgccttgccgagcttgagctgattgttgaagaagaa
gccctaccgctaccgaatattccagccgttgatccggtatttcacaccttaaatgctgaa
caacaagccgctttgcatgcgattgagccctacttaggtcgttttaaagcttgtttgcta
gaaggcgttaccggttctggcaaaaccgaagtctatctacgtttaatcaatcaggtcttg
agtaaaggccaacaagccttggtattggtgccagaaattgggctcacgccacaaacggtt
cagcgctttcaagaacgctttaatgtccccgttgctctgttgcacagtggtttgaatgat
cgtgaacgcctacaaggttggcgtcaggtcagcgaaggcaaagcccgcattcttatcgga
acacgctcggcagtgtttacccccatgccagagcttggtctgattattttggacgaagaa
cacgacggctcgtttaagcagcaagatggtttgcgctattccgctcgcgacttcgcctta
gtgcgcgcgcatcaaagccaagtgcccatcgtactgggttcagcaacgccctctttagaa
accttgcacaatgcgctgacgggtcgctatttacacttaaaactgacccaacgtgccggc
aaagccaaaccgccgcaaatgaagctgcacagtatattgcatcagccactgacggcaggg
tttgctcaacccgtgttggccgccatgcaaaaacatttagaaaataataagcaggtgctg
gtatttattaaccgtcgtggttttgcccccttgctcgcgtgtcgtgattgcggttggatg
gcggaatgtcgccgctgcgacgcacgcctaaccctgcaccaatatccaccgcacttgcat
tgccatcattgcgattttcaacaaggtattcccgcgcactgcccgcagtgccaaagccat
aaagtagaagccgtaggccaaggcaccgagcgcattgaagagcagctcgcgcagctattt
ccgcaacgcccaattcgccgcgttgatcgcgatacggtgcgcaataaacaggcgttcgac
gagctatttaatgagattcacaccggaggctcgtgcattttggtcggcacacaaatgctg
gccaaagggcatcattttccggatgtgaccttggtggtgattctcgatagcgatgccgga
ttgttcagtgccgattttcgcggcatggagcacagcgcacaattaatcgaacaagtatcc
ggacgagctgggcgggctgatagccccgggcaagtatggattcaaaccttgtatgccgat
cacccacaactcaatctgctgattgacagtggctatcatgcgttagccctgtccatgctg
caggagcgccagctacagcagctaccaccctatactcacatggctttgctgcgcagcgag
tgtgaagatcgcattcaaacccaacaactactgcaacaggcgcgtgcctttattcaagat
tggctgcgccaacatgctcatgataatgcaccggtaacgctgctcgggccgtttcctgcg
attatggaacgacgagctgggcgcttccgttaccaactgcaattgttctgtccagggcgc
gttccactgcatcaaaccttagaagccctcgtgcagtatttgcagcagctgaaaggcttt
ggcaaagtacgctggaatttagacgttgatccactcgatacgatataa
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