Thalassolituus oleivorans R6-15: R615_16060
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Entry
R615_16060 CDS
T03056
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tor
Thalassolituus oleivorans R6-15
Pathway
tor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R615_16060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tor03021
]
R615_16060
03400 DNA repair and recombination proteins [BR:
tor03400
]
R615_16060
Enzymes [BR:
tor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R615_16060
Transcription machinery [BR:
tor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R615_16060
DNA repair and recombination proteins [BR:
tor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R615_16060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF7026
Motif
Other DBs
NCBI-ProteinID:
AHK16923
LinkDB
All DBs
Position
complement(3463649..3464650)
Genome browser
AA seq
333 aa
AA seq
DB search
MQRAVNEFLTPRHIQVDEVNNTHAKVTLEPLERGFGHTLGNALRRILLSSMPGAAIVECE
IDGVLHEYSAIDGVQEDVIEILLNLKGVAVKLHERDEASLTLTKVGPGIVTAADIQLDHG
VEIANPGHVLAHLGEGTELKMSLKVSSGRGYETVEARNQNDEETKAIGKLQLDATYSPVK
RVSYSVDSARVEQRTDLDKLVIDLETNGTIDPEEAIRRSATILQQQLAIFVNLENDEVVE
QIREEEEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMHLENWPPASLRNDDKVLA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtgcagttaatgaatttttgacacctcgtcacatccaggtggacgaagtaaac
aatacccatgccaaggtaacacttgagccgctagagcgcggtttcggtcacactctgggc
aacgcattacgtcgtatcctgctgtcttctatgccaggcgcagcgatcgtggaatgtgag
atcgatggcgttttgcatgagtacagcgctattgatggtgttcaggaagatgtgattgag
atcctactgaacctcaaaggtgttgcggtcaaattgcatgaacgtgacgaagcttctcta
accttgaccaaagttggtcctggtatagtgacagctgccgatattcaactggatcacggt
gttgagattgcaaacccaggtcatgttctagctcatttgggcgaaggcactgaactgaaa
atgagcctgaaggtatcttctggtcgcggctacgaaactgttgaagctcgtaaccaaaac
gatgaagaaactaaggcgattggtaaattgcagcttgatgctacctacagcccagttaag
cgtgtttcatacagcgtcgatagcgctcgtgtagaacaacgcactgacttggataagctg
gtcattgatcttgagaccaatggcacaattgatccagaagaagcgatccgtcgttccgcg
actatcttgcaacagcagttagcaattttcgtaaatctagaaaacgacgaagtcgtagaa
cagattcgcgaagaagaagagatcgatccgattctacttcgtccagtggacgacttagaa
ttgaccgttcgctctgctaactgtctgaaagcagaaaatatttactacatcggtgatctg
attcagcgcactgaagttgagctgttgaagactcctaacttaggtaaaaagtctctgact
gaaattaaagacgttcttgcgtcacgcggcctgtcgttgggtatgcatctggaaaactgg
ccacctgccagtctccggaacgacgacaaagtgctagcgtaa
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